The 2.0 version of rSNPBase

Variant report

Variant rs2671227
Chromosome Location chr1:56150777-56150778
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:15 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56135800-56162000 Weak transcription Aorta Aorta
2 chr1:56138000-56155600 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr1:56146200-56151000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:56146400-56155400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr1:56148200-56150800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr1:56148400-56150800 Weak transcription Fetal Lung lung
7 chr1:56149200-56151200 Enhancers A549 lung
8 chr1:56149400-56150800 Enhancers Muscle Satellite Cultured Cells --
9 chr1:56149400-56153400 Enhancers NHDF-Ad bronchial
10 chr1:56149800-56150800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr1:56150000-56150800 Enhancers Osteobl bone
12 chr1:56150000-56152600 Enhancers Placenta Amnion Placenta Amnion
13 chr1:56150200-56151200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:56150400-56151000 Enhancers NHLF lung
15 chr1:56150600-56151800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015