The 2.0 version of rSNPBase

Variant report

Variant rs2671233
Chromosome Location chr1:56163719-56163720
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56158400-56170800 Enhancers NHDF-Ad bronchial
2 chr1:56159200-56163800 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr1:56159600-56164000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
4 chr1:56159600-56164000 Enhancers NHLF lung
5 chr1:56159600-56166800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:56159800-56164800 Enhancers Fetal Lung lung
7 chr1:56160600-56164000 Enhancers Fetal Heart heart
8 chr1:56161400-56165800 Weak transcription Rectal Smooth Muscle rectum
9 chr1:56161400-56169400 Weak transcription Placenta Placenta
10 chr1:56161600-56165800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:56162000-56165000 Weak transcription Colon Smooth Muscle Colon
12 chr1:56162200-56164000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:56162400-56166000 Weak transcription HSMM muscle
14 chr1:56162400-56169400 Weak transcription Ovary ovary
15 chr1:56162600-56166200 Weak transcription HSMMtube muscle
16 chr1:56162800-56165800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:56162800-56165800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:56163000-56164600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:56163000-56164800 Weak transcription Muscle Satellite Cultured Cells --
20 chr1:56163000-56165800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:56163000-56166000 Weak transcription NH-A brain
22 chr1:56163400-56165400 Weak transcription Osteobl bone
23 chr1:56163400-56166200 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015