The 2.0 version of rSNPBase

Variant report

Variant rs2819491
Chromosome Location chr1:56164515-56164516
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56158400-56170800 Enhancers NHDF-Ad bronchial
2 chr1:56159600-56166800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr1:56159800-56164800 Enhancers Fetal Lung lung
4 chr1:56161400-56165800 Weak transcription Rectal Smooth Muscle rectum
5 chr1:56161400-56169400 Weak transcription Placenta Placenta
6 chr1:56161600-56165800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:56162000-56165000 Weak transcription Colon Smooth Muscle Colon
8 chr1:56162400-56166000 Weak transcription HSMM muscle
9 chr1:56162400-56169400 Weak transcription Ovary ovary
10 chr1:56162600-56166200 Weak transcription HSMMtube muscle
11 chr1:56162800-56165800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr1:56162800-56165800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr1:56163000-56164600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:56163000-56164800 Weak transcription Muscle Satellite Cultured Cells --
15 chr1:56163000-56165800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:56163000-56166000 Weak transcription NH-A brain
17 chr1:56163400-56165400 Weak transcription Osteobl bone
18 chr1:56163400-56166200 Weak transcription Fetal Stomach stomach
19 chr1:56163800-56165000 Enhancers Fetal Kidney kidney
20 chr1:56163800-56165800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:56164400-56165200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:56164400-56167200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:56164400-56167800 Enhancers NHLF lung

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Last update: Aug 31, 2015