The 2.0 version of rSNPBase

Variant report

Variant rs1514141
Chromosome Location chr1:56161478-56161479
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56135800-56162000 Weak transcription Aorta Aorta
2 chr1:56158400-56170800 Enhancers NHDF-Ad bronchial
3 chr1:56159000-56162800 Enhancers Fetal Muscle Leg muscle
4 chr1:56159200-56162200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:56159200-56163800 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr1:56159400-56163400 Enhancers Placenta Amnion Placenta Amnion
7 chr1:56159600-56162800 Enhancers Psoas Muscle Psoas
8 chr1:56159600-56163000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr1:56159600-56163000 Enhancers Skeletal Muscle Male skeletal muscle
10 chr1:56159600-56164000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:56159600-56164000 Enhancers NHLF lung
12 chr1:56159600-56166800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:56159800-56162800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:56159800-56163000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:56159800-56163400 Enhancers Osteobl bone
16 chr1:56159800-56164800 Enhancers Fetal Lung lung
17 chr1:56160000-56162000 Enhancers Colon Smooth Muscle Colon
18 chr1:56160000-56163000 Enhancers Muscle Satellite Cultured Cells --
19 chr1:56160000-56163000 Enhancers Skeletal Muscle Female skeletal muscle
20 chr1:56160000-56163000 Enhancers NH-A brain
21 chr1:56160200-56162200 Enhancers NHEK skin
22 chr1:56160200-56162800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:56160400-56161600 Enhancers Adipose Nuclei Adipose
24 chr1:56160400-56162000 Weak transcription Fetal Muscle Trunk muscle
25 chr1:56160400-56162400 Enhancers HSMM muscle
26 chr1:56160400-56162800 Enhancers Fetal Stomach stomach
27 chr1:56160600-56164000 Enhancers Fetal Heart heart
28 chr1:56160800-56161800 Weak transcription HSMMtube muscle
29 chr1:56161000-56162600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:56161200-56161600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr1:56161200-56162000 Weak transcription Ovary ovary
32 chr1:56161200-56162200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:56161400-56161600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:56161400-56162200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr1:56161400-56162600 Enhancers Right Atrium heart
36 chr1:56161400-56162600 Weak transcription Right Ventricle heart
37 chr1:56161400-56165800 Weak transcription Rectal Smooth Muscle rectum
38 chr1:56161400-56169400 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015