Variant report

Variant	rs2708918
Chromosome Location	chr2:113641363-113641364
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:113629793..113631515-chr2:113640050..113642411,2	K562	blood:
2	chr2:113629793..113632974-chr2:113640050..113642612,3	K562	blood:
3	chr2:113551891..113553444-chr2:113640902..113642411,2	K562	blood:
4	chr2:113509910..113512793-chr2:113641037..113644558,4	K562	blood:
5	chr2:113636674..113639363-chr2:113640556..113642756,3	K562	blood:
6	chr2:113636464..113639122-chr2:113640556..113642756,3	K562	blood:

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs17042569	1.00[AMR][1000 genomes]
rs2466449	1.00[EUR][1000 genomes]
rs2708922	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2708923	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2708934	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2708972	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2708973	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2723153	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2723155	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2723161	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2723172	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2723176	1.00[EUR][1000 genomes]
rs2723186	1.00[EUR][1000 genomes]
rs2723191	1.00[EUR][1000 genomes]
rs2723194	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2723195	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3917349	1.00[EUR][1000 genomes]
rs3917367	1.00[AMR][1000 genomes]
rs4392270	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4848305	1.00[EUR][1000 genomes]
rs7602680	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113629200-113643200	Weak transcription	Right Atrium	heart
2	chr2:113632800-113641600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr2:113632800-113644400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr2:113637000-113643600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr2:113638400-113642400	Weak transcription	Primary T cells fromperipheralblood	blood
6	chr2:113638600-113642400	Weak transcription	Fetal Thymus	thymus
7	chr2:113639200-113642200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr2:113639200-113642200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr2:113639200-113642400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr2:113639200-113642400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr2:113639200-113644400	Enhancers	NHEK	skin
12	chr2:113639200-113647800	Weak transcription	Rectal Mucosa Donor 31	rectum
13	chr2:113639400-113642200	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr2:113639400-113642200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
15	chr2:113639600-113642200	Weak transcription	Hela-S3	cervix
16	chr2:113639600-113642400	Weak transcription	Primary hematopoietic stem cells	blood
17	chr2:113639600-113642400	Weak transcription	K562	blood
18	chr2:113639600-113645400	Weak transcription	Primary neutrophils fromperipheralblood	blood
19	chr2:113640000-113642200	Weak transcription	Primary monocytes fromperipheralblood	blood
20	chr2:113640000-113642600	Weak transcription	Osteobl	bone
21	chr2:113640200-113642200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr2:113640200-113642400	Weak transcription	Monocytes-CD14+_RO01746	blood
23	chr2:113640400-113642200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr2:113640400-113642200	Weak transcription	GM12878-XiMat	blood
25	chr2:113640400-113642400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr2:113640400-113645400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
27	chr2:113640400-113647800	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr2:113640600-113642200	Weak transcription	HMEC	breast
29	chr2:113640800-113642400	Weak transcription	NHDF-Ad	bronchial
30	chr2:113641000-113642400	Weak transcription	Brain Hippocampus Middle	brain

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