Variant report

Variant	rs4848305
Chromosome Location	chr2:113585147-113585148
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs2466449	1.00[EUR][1000 genomes]
rs2708918	1.00[EUR][1000 genomes]
rs2708922	1.00[EUR][1000 genomes]
rs2708923	1.00[EUR][1000 genomes]
rs2708934	1.00[EUR][1000 genomes]
rs2708972	1.00[EUR][1000 genomes]
rs2708973	1.00[EUR][1000 genomes]
rs2723153	1.00[EUR][1000 genomes]
rs2723155	1.00[EUR][1000 genomes]
rs2723161	1.00[EUR][1000 genomes]
rs2723172	1.00[EUR][1000 genomes]
rs2723176	1.00[EUR][1000 genomes]
rs2723186	1.00[EUR][1000 genomes]
rs2723191	1.00[EUR][1000 genomes]
rs2723194	1.00[EUR][1000 genomes]
rs2723195	1.00[EUR][1000 genomes]
rs3917349	1.00[EUR][1000 genomes]
rs4392270	1.00[EUR][1000 genomes]
rs7602680	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3386145	chr2:113584752-113585197	Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113580000-113586800	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr2:113582200-113588800	Weak transcription	Lung	lung
3	chr2:113582400-113586400	Weak transcription	Primary hematopoietic stem cells	blood
4	chr2:113582400-113592000	Weak transcription	NH-A	brain
5	chr2:113582800-113587000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr2:113582800-113589400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr2:113583000-113585400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr2:113583000-113585400	Weak transcription	Pancreas	Pancrea
9	chr2:113583000-113587000	Weak transcription	NHEK	skin
10	chr2:113583000-113587200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr2:113583000-113592200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr2:113583600-113585600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr2:113583600-113587200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr2:113583600-113587200	Weak transcription	HMEC	breast
15	chr2:113583600-113591200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr2:113583600-113592000	Weak transcription	Osteobl	bone
17	chr2:113584600-113585200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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