Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:113674868..113678484-chr2:113678490..113681949,3	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IL37-2	chr2:113679974-113683444	ucscGeneNc_uc002tji_1

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs17042569	1.00[AMR][1000 genomes]
rs2466449	1.00[EUR][1000 genomes]
rs2708918	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2708922	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2708923	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2708934	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2708972	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2708973	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2723153	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2723155	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2723172	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2723176	1.00[EUR][1000 genomes]
rs2723186	1.00[EUR][1000 genomes]
rs2723191	1.00[EUR][1000 genomes]
rs2723194	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2723195	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3917349	1.00[EUR][1000 genomes]
rs3917367	1.00[AMR][1000 genomes]
rs4392270	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4848305	1.00[EUR][1000 genomes]
rs7602680	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv961338	chr2:113657963-113691422	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1003372	chr2:113670890-113682621	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113671600-113683000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr2:113674400-113683000	Weak transcription	Gastric	stomach
3	chr2:113677200-113681800	Weak transcription	Stomach Mucosa	stomach
4	chr2:113678200-113683400	Enhancers	Fetal Intestine Small	intestine
5	chr2:113678800-113683400	Enhancers	Rectal Mucosa Donor 31	rectum
6	chr2:113679000-113681800	Weak transcription	Primary T cells fromperipheralblood	blood
7	chr2:113679200-113682400	Enhancers	Sigmoid Colon	Sigmoid Colon
8	chr2:113679600-113682800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
9	chr2:113680600-113681000	Weak transcription	Colonic Mucosa	Colon
10	chr2:113680600-113681000	Weak transcription	Rectal Mucosa Donor 29	rectum
11	chr2:113680600-113681200	Enhancers	K562	blood
12	chr2:113680600-113681400	Enhancers	Brain Hippocampus Middle	brain
13	chr2:113680600-113681600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr2:113680800-113681200	Weak transcription	Fetal Intestine Large	intestine

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