Variant report

Variant rs2729543
Chromosome Location chr7:111820478-111820479
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:111802600-111825200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr7:111803000-111825400 Weak transcription NHEK skin
3 chr7:111803600-111825400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr7:111808800-111822800 Weak transcription Pancreas Pancrea
5 chr7:111812000-111824200 Enhancers Brain Substantia Nigra brain
6 chr7:111812400-111822400 Enhancers Brain Anterior Caudate brain
7 chr7:111813800-111821200 Enhancers Brain Hippocampus Middle brain
8 chr7:111814000-111823800 Weak transcription Liver Liver
9 chr7:111814000-111836000 Weak transcription Fetal Brain Female brain
10 chr7:111814400-111824200 Weak transcription Adipose Nuclei Adipose
11 chr7:111815800-111821200 Enhancers Brain Inferior Temporal Lobe brain
12 chr7:111816000-111822800 Enhancers Brain Cingulate Gyrus brain
13 chr7:111817200-111826200 Enhancers Brain Angular Gyrus brain
14 chr7:111817400-111822800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr7:111817400-111835800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr7:111818200-111823400 Weak transcription H9 Cell Line embryonic stem cell
17 chr7:111818600-111821800 Weak transcription HepG2 liver
18 chr7:111819400-111820800 Enhancers Skeletal Muscle Male skeletal muscle
19 chr7:111819400-111821000 Enhancers HUVEC blood vessel
20 chr7:111819800-111821600 Enhancers Fetal Brain Male brain
21 chr7:111819800-111822400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr7:111819800-111824600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr7:111820000-111820600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
24 chr7:111820000-111821000 Enhancers Psoas Muscle Psoas
25 chr7:111820200-111820600 Enhancers Fetal Lung lung
26 chr7:111820200-111820800 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr7:111820200-111820800 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr7:111820200-111820800 Enhancers Fetal Muscle Leg muscle
29 chr7:111820200-111821000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
30 chr7:111820200-111821000 Enhancers Left Ventricle heart
31 chr7:111820200-111821000 Enhancers Right Atrium heart
32 chr7:111820200-111821000 Enhancers Right Ventricle heart
33 chr7:111820200-111821000 Enhancers Skeletal Muscle Female skeletal muscle
34 chr7:111820200-111821000 Flanking Active TSS Stomach Smooth Muscle stomach
35 chr7:111820200-111821600 Enhancers Lung lung
36 chr7:111820400-111820600 Enhancers Gastric stomach
37 chr7:111820400-111820600 Flanking Active TSS Rectal Smooth Muscle rectum
38 chr7:111820400-111820800 Enhancers H1 Cell Line embryonic stem cell
39 chr7:111820400-111820800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr7:111820400-111820800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr7:111820400-111820800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr7:111820400-111820800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr7:111820400-111820800 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr7:111820400-111820800 Flanking Active TSS Colon Smooth Muscle Colon
45 chr7:111820400-111821000 Enhancers iPS-18 Cell Line embryonic stem cell
46 chr7:111820400-111821000 Flanking Active TSS Aorta Aorta
47 chr7:111820400-111821600 Enhancers Ovary ovary
48 chr7:111820400-111822600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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