The 2.0 version of rSNPBase

Variant report

Variant rs28563007
Chromosome Location chr7:111949381-111949382
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:111913200-111965200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr7:111913600-111949600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr7:111918000-111963000 Weak transcription Aorta Aorta
4 chr7:111921400-111961800 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr7:111922000-111949800 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr7:111922400-111949800 Weak transcription Ovary ovary
7 chr7:111923600-111964600 Weak transcription Esophagus oesophagus
8 chr7:111923600-111964800 Weak transcription Gastric stomach
9 chr7:111926200-111979600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr7:111926600-111982200 Weak transcription Right Ventricle heart
11 chr7:111926800-111949800 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr7:111926800-111949800 Weak transcription Duodenum Mucosa Duodenum
13 chr7:111926800-111962000 Weak transcription Fetal Brain Female brain
14 chr7:111926800-111964800 Weak transcription Lung lung
15 chr7:111927200-111965000 Weak transcription Brain Anterior Caudate brain
16 chr7:111927400-111964800 Weak transcription Fetal Stomach stomach
17 chr7:111928600-111978000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr7:111928800-111949800 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr7:111928800-111949800 Weak transcription Fetal Muscle Leg muscle
20 chr7:111928800-111950000 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr7:111928800-111961000 Weak transcription Placenta Placenta
22 chr7:111929000-111949600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr7:111929000-111949800 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr7:111929000-111958800 Weak transcription Fetal Thymus thymus
25 chr7:111929000-111959000 Weak transcription Fetal Intestine Large intestine
26 chr7:111930000-111949800 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr7:111930200-111961800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr7:111930600-111959000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr7:111930800-111965200 Weak transcription Muscle Satellite Cultured Cells --
30 chr7:111931000-111949400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr7:111931000-111949800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr7:111931000-111981000 Weak transcription HSMMtube muscle
33 chr7:111933000-111958600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr7:111934000-111965200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr7:111936800-111959800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr7:111938000-111953400 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr7:111938000-111965000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr7:111938200-111949600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr7:111938200-111949800 Weak transcription Fetal Lung lung
40 chr7:111938400-111949800 Weak transcription Adipose Nuclei Adipose
41 chr7:111938400-111958400 Weak transcription Primary monocytes fromperipheralblood blood
42 chr7:111938800-111949600 Weak transcription Liver Liver
43 chr7:111939200-111961800 Weak transcription Psoas Muscle Psoas
44 chr7:111939200-111964600 Weak transcription Left Ventricle heart
45 chr7:111939600-111958200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr7:111940000-111964800 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr7:111941000-111963200 Weak transcription Fetal Brain Male brain
48 chr7:111941600-111960400 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr7:111943000-111949800 Weak transcription HepG2 liver
50 chr7:111943000-111960400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015