The 2.0 version of rSNPBase

Variant report

Variant rs10279631
Chromosome Location chr7:111878594-111878595
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:111848000-111892800 Weak transcription Primary B cells from cord blood blood
2 chr7:111863800-111879000 Weak transcription Fetal Intestine Small intestine
3 chr7:111863800-111900200 Weak transcription Left Ventricle heart
4 chr7:111866800-111887000 Weak transcription HSMMtube muscle
5 chr7:111873400-111878600 Weak transcription Right Ventricle heart
6 chr7:111873600-111878600 Weak transcription Pancreas Pancrea
7 chr7:111874000-111879200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr7:111876800-111880200 Enhancers A549 lung
9 chr7:111876800-111891800 Weak transcription Primary T cells from cord blood blood
10 chr7:111877000-111893600 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr7:111877200-111879000 Weak transcription NHLF lung
12 chr7:111877600-111878600 Weak transcription Liver Liver
13 chr7:111878000-111879600 Enhancers NHEK skin
14 chr7:111878000-111879800 Enhancers HMEC breast
15 chr7:111878200-111878600 Bivalent Enhancer iPS DF 6.9 Cell Line embryonic stem cell
16 chr7:111878200-111878600 ZNF genes & repeats Primary hematopoietic stem cells blood
17 chr7:111878200-111878800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
18 chr7:111878200-111878800 Enhancers Lung lung
19 chr7:111878200-111879400 Enhancers Psoas Muscle Psoas
20 chr7:111878200-111879600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr7:111878400-111878800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr7:111878400-111879000 Enhancers Gastric stomach
23 chr7:111878400-111879600 Enhancers iPS-15b Cell Line embryonic stem cell
24 chr7:111878400-111879600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr7:111878400-111879600 Enhancers Muscle Satellite Cultured Cells --
26 chr7:111878400-111879600 Genic enhancers HepG2 liver
27 chr7:111878400-111879600 Enhancers Osteobl bone
28 chr7:111878400-111879800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr7:111878400-111879800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015