The 2.0 version of rSNPBase

Variant report

Variant rs6977379
Chromosome Location chr7:111821830-111821831
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:111802600-111825200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr7:111803000-111825400 Weak transcription NHEK skin
3 chr7:111803600-111825400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr7:111808800-111822800 Weak transcription Pancreas Pancrea
5 chr7:111812000-111824200 Enhancers Brain Substantia Nigra brain
6 chr7:111812400-111822400 Enhancers Brain Anterior Caudate brain
7 chr7:111814000-111823800 Weak transcription Liver Liver
8 chr7:111814000-111836000 Weak transcription Fetal Brain Female brain
9 chr7:111814400-111824200 Weak transcription Adipose Nuclei Adipose
10 chr7:111816000-111822800 Enhancers Brain Cingulate Gyrus brain
11 chr7:111817200-111826200 Enhancers Brain Angular Gyrus brain
12 chr7:111817400-111822800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr7:111817400-111835800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr7:111818200-111823400 Weak transcription H9 Cell Line embryonic stem cell
15 chr7:111819800-111822400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr7:111819800-111824600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr7:111820400-111822600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr7:111820600-111822600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr7:111820600-111822800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr7:111820600-111823000 Weak transcription Fetal Lung lung
21 chr7:111820600-111826000 Weak transcription Gastric stomach
22 chr7:111820800-111822000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr7:111820800-111822800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr7:111820800-111822800 Weak transcription Fetal Muscle Leg muscle
25 chr7:111820800-111823000 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr7:111820800-111823400 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr7:111820800-111825800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr7:111820800-111831200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr7:111821000-111822000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr7:111821000-111822400 Weak transcription HUVEC blood vessel
31 chr7:111821000-111822600 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr7:111821000-111822800 Weak transcription Colon Smooth Muscle Colon
33 chr7:111821000-111822800 Weak transcription Left Ventricle heart
34 chr7:111821000-111822800 Weak transcription Psoas Muscle Psoas
35 chr7:111821000-111822800 Weak transcription Right Atrium heart
36 chr7:111821000-111822800 Weak transcription Right Ventricle heart
37 chr7:111821000-111822800 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr7:111821000-111822800 Weak transcription Stomach Smooth Muscle stomach
39 chr7:111821600-111822800 Weak transcription Lung lung
40 chr7:111821600-111822800 Weak transcription Ovary ovary
41 chr7:111821600-111824400 Enhancers Brain Hippocampus Middle brain
42 chr7:111821600-111826400 Enhancers Brain Inferior Temporal Lobe brain
43 chr7:111821600-111827600 Weak transcription Fetal Brain Male brain
44 chr7:111821800-111824600 Enhancers HepG2 liver

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Last update: Aug 31, 2015