The 2.0 version of rSNPBase

Variant report

Variant rs2729545
Chromosome Location chr7:111819029-111819030
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:111802600-111825200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr7:111803000-111825400 Weak transcription NHEK skin
3 chr7:111803600-111820400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr7:111803600-111825400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr7:111808800-111822800 Weak transcription Pancreas Pancrea
6 chr7:111812000-111824200 Enhancers Brain Substantia Nigra brain
7 chr7:111812400-111819400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr7:111812400-111822400 Enhancers Brain Anterior Caudate brain
9 chr7:111813800-111819200 Weak transcription Stomach Smooth Muscle stomach
10 chr7:111813800-111820400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr7:111813800-111821200 Enhancers Brain Hippocampus Middle brain
12 chr7:111814000-111819400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr7:111814000-111819400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr7:111814000-111820200 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr7:111814000-111820200 Weak transcription Colon Smooth Muscle Colon
16 chr7:111814000-111823800 Weak transcription Liver Liver
17 chr7:111814000-111836000 Weak transcription Fetal Brain Female brain
18 chr7:111814200-111820200 Weak transcription Right Atrium heart
19 chr7:111814400-111819600 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr7:111814400-111820200 Weak transcription Left Ventricle heart
21 chr7:111814400-111824200 Weak transcription Adipose Nuclei Adipose
22 chr7:111814600-111819400 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr7:111814600-111820200 Weak transcription Right Ventricle heart
24 chr7:111815800-111821200 Enhancers Brain Inferior Temporal Lobe brain
25 chr7:111816000-111822800 Enhancers Brain Cingulate Gyrus brain
26 chr7:111816600-111820200 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr7:111817200-111826200 Enhancers Brain Angular Gyrus brain
28 chr7:111817400-111819400 Weak transcription HUVEC blood vessel
29 chr7:111817400-111822800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr7:111817400-111835800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr7:111817600-111820200 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr7:111817600-111820400 Weak transcription Ovary ovary
33 chr7:111817800-111820400 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr7:111818200-111819400 Enhancers Psoas Muscle Psoas
35 chr7:111818200-111823400 Weak transcription H9 Cell Line embryonic stem cell
36 chr7:111818600-111820200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr7:111818600-111821800 Weak transcription HepG2 liver
38 chr7:111818800-111820400 Weak transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015