The 2.0 version of rSNPBase

Variant report

Variant rs10248735
Chromosome Location chr7:111839423-111839424
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:111823200-111843200 Weak transcription Stomach Smooth Muscle stomach
2 chr7:111826000-111842200 Enhancers HUVEC blood vessel
3 chr7:111829200-111842600 Weak transcription Psoas Muscle Psoas
4 chr7:111831800-111842600 Weak transcription Right Ventricle heart
5 chr7:111832000-111842600 Weak transcription Left Ventricle heart
6 chr7:111833400-111841400 Weak transcription NH-A brain
7 chr7:111836200-111843000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr7:111836200-111843000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr7:111836400-111840800 Weak transcription Ovary ovary
10 chr7:111836600-111839600 Weak transcription Brain Cingulate Gyrus brain
11 chr7:111836600-111840800 Weak transcription Brain Inferior Temporal Lobe brain
12 chr7:111836600-111843000 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr7:111836600-111843600 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr7:111836800-111843000 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr7:111836800-111843000 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr7:111836800-111843800 Weak transcription Lung lung
17 chr7:111837600-111841000 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr7:111837600-111841800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr7:111837800-111841200 Enhancers NHEK skin
20 chr7:111838000-111842600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr7:111838200-111840200 Enhancers HepG2 liver
22 chr7:111838200-111840400 Enhancers Hela-S3 cervix
23 chr7:111838400-111840000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr7:111838400-111843000 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr7:111838600-111839600 Weak transcription Brain Angular Gyrus brain
26 chr7:111838600-111839800 Weak transcription Brain Hippocampus Middle brain
27 chr7:111838600-111839800 Enhancers HMEC breast
28 chr7:111838600-111840200 Enhancers Muscle Satellite Cultured Cells --
29 chr7:111838600-111843200 Weak transcription Colon Smooth Muscle Colon
30 chr7:111838600-111844200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr7:111838800-111839800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr7:111838800-111840000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr7:111838800-111840000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr7:111838800-111840200 Enhancers Osteobl bone
35 chr7:111839000-111839600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr7:111839000-111839600 Enhancers NHDF-Ad bronchial
37 chr7:111839000-111839800 Weak transcription Brain Anterior Caudate brain
38 chr7:111839000-111840000 Enhancers Fetal Lung lung
39 chr7:111839000-111840200 Enhancers Liver Liver
40 chr7:111839000-111840200 Enhancers NHLF lung
41 chr7:111839000-111840400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr7:111839000-111840400 Enhancers Skeletal Muscle Male skeletal muscle
43 chr7:111839000-111843000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr7:111839200-111839600 Enhancers HSMM muscle
45 chr7:111839200-111840000 Flanking Active TSS A549 lung
46 chr7:111839200-111844000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr7:111839400-111839600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr7:111839400-111841400 Enhancers Brain Substantia Nigra brain

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Last update: Aug 31, 2015