Variant report

Variant	rs2842047
Chromosome Location	chr1:69586835-69586836
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11209393	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12083168	0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2484869	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2484870	0.90[ASN][1000 genomes]
rs2494928	0.96[ASN][1000 genomes]
rs2494930	0.92[ASN][1000 genomes]
rs2661464	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2661465	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2661466	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2661468	0.92[ASN][1000 genomes]
rs2784823	0.98[ASN][1000 genomes]
rs2842050	0.96[ASN][1000 genomes]
rs2842052	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2842053	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3123012	0.86[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:69586000-69587000	Enhancers	Fetal Brain Male	brain
2	chr1:69586200-69588400	Enhancers	Adipose Nuclei	Adipose
3	chr1:69586200-69588600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr1:69586400-69587200	Weak transcription	HMEC	breast
5	chr1:69586400-69592400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr1:69586400-69596800	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr1:69586600-69587000	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr1:69586600-69587400	Weak transcription	Brain Angular Gyrus	brain
9	chr1:69586600-69588000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr1:69586600-69588600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr1:69586600-69588600	Weak transcription	Brain Hippocampus Middle	brain
12	chr1:69586800-69587000	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr1:69586800-69587000	Enhancers	Aorta	Aorta
14	chr1:69586800-69587200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr1:69586800-69592400	Weak transcription	H1 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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