The 2.0 version of rSNPBase

Variant report

Variant rs28472992
Chromosome Location chr3:136406708-136406709
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:136381800-136410800 Weak transcription Psoas Muscle Psoas
2 chr3:136386400-136412800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr3:136387200-136412400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr3:136390200-136413000 Weak transcription Pancreas Pancrea
5 chr3:136390600-136412000 Weak transcription Thymus Thymus
6 chr3:136390800-136407200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr3:136390800-136447800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr3:136393800-136408400 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr3:136394200-136409800 Weak transcription Primary hematopoietic stem cells blood
10 chr3:136395000-136407600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr3:136395000-136410200 Weak transcription Small Intestine intestine
12 chr3:136395000-136418200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr3:136395400-136407600 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr3:136396600-136407400 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr3:136396600-136411800 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr3:136398600-136410200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr3:136400600-136412000 Weak transcription Primary B cells from cord blood blood
18 chr3:136400800-136407400 Weak transcription Colon Smooth Muscle Colon
19 chr3:136402400-136409000 Weak transcription Primary monocytes fromperipheralblood blood
20 chr3:136403600-136408600 Weak transcription Lung lung
21 chr3:136403600-136410800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr3:136404800-136410600 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr3:136405000-136412400 Weak transcription Fetal Intestine Small intestine
24 chr3:136405400-136407400 Weak transcription HepG2 liver
25 chr3:136405400-136407800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr3:136405400-136409200 Weak transcription K562 blood
27 chr3:136405400-136410200 Weak transcription Left Ventricle heart
28 chr3:136405400-136413000 Weak transcription Fetal Heart heart
29 chr3:136405600-136410200 Weak transcription GM12878-XiMat blood
30 chr3:136406000-136408000 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr3:136406200-136409800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015