The 2.0 version of rSNPBase

Variant report

Variant rs28489326
Chromosome Location chr3:136634546-136634547
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:136613200-136648800 Weak transcription Muscle Satellite Cultured Cells --
2 chr3:136613600-136638600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr3:136619200-136656800 Weak transcription NHLF lung
4 chr3:136624200-136664400 Weak transcription Aorta Aorta
5 chr3:136624600-136637600 Weak transcription Primary hematopoietic stem cells blood
6 chr3:136624600-136639800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr3:136626000-136638400 Weak transcription Duodenum Mucosa Duodenum
8 chr3:136626000-136646400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr3:136626000-136661600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr3:136626200-136640200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr3:136626400-136635600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr3:136626400-136636600 Weak transcription Right Ventricle heart
13 chr3:136626400-136637400 Weak transcription Left Ventricle heart
14 chr3:136626400-136646800 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr3:136626400-136647000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr3:136626400-136648800 Weak transcription HMEC breast
17 chr3:136626400-136649200 Weak transcription Stomach Smooth Muscle stomach
18 chr3:136626600-136636400 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr3:136626600-136650600 Weak transcription Esophagus oesophagus
20 chr3:136626600-136661000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr3:136627600-136636000 Weak transcription Psoas Muscle Psoas
22 chr3:136628000-136637200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr3:136628000-136643600 Weak transcription Small Intestine intestine
24 chr3:136628800-136650600 Weak transcription Brain Hippocampus Middle brain
25 chr3:136629200-136634800 Weak transcription Hela-S3 cervix
26 chr3:136629400-136635200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr3:136629400-136635800 Weak transcription Primary T cells from cord blood blood
28 chr3:136630800-136635200 Weak transcription HUVEC blood vessel
29 chr3:136631000-136635000 Enhancers Primary Natural Killer cells fromperipheralblood blood
30 chr3:136631000-136636200 Enhancers Primary T cells fromperipheralblood blood
31 chr3:136631200-136639800 Enhancers Primary T helper cells PMA-I stimulated --
32 chr3:136631600-136644200 Weak transcription A549 lung
33 chr3:136632000-136640600 Weak transcription Fetal Stomach stomach
34 chr3:136632000-136643400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:136632000-136646800 Weak transcription Primary B cells from peripheral blood blood
36 chr3:136632200-136634800 Weak transcription Dnd41 blood
37 chr3:136632200-136635600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr3:136632200-136638800 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr3:136632400-136634800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr3:136632400-136635600 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr3:136632400-136636000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr3:136632400-136643400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr3:136632400-136646600 Weak transcription Fetal Thymus thymus
44 chr3:136632600-136657000 Weak transcription HepG2 liver
45 chr3:136632800-136637800 Weak transcription Primary B cells from cord blood blood
46 chr3:136633000-136641800 Enhancers Primary T helper cells fromperipheralblood blood
47 chr3:136633200-136636200 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr3:136633400-136638400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
49 chr3:136633400-136639400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr3:136633800-136634600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015