The 2.0 version of rSNPBase

Variant report

Variant rs9867325
Chromosome Location chr3:136618909-136618910
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:136592000-136622400 Weak transcription Aorta Aorta
2 chr3:136593800-136619600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr3:136609400-136625200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr3:136612400-136620800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr3:136613000-136622400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr3:136613200-136619800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr3:136613200-136619800 Weak transcription Liver Liver
8 chr3:136613200-136648800 Weak transcription Muscle Satellite Cultured Cells --
9 chr3:136613400-136619000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr3:136613400-136621600 Weak transcription Thymus Thymus
11 chr3:136613400-136625400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr3:136613400-136626200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr3:136613600-136621400 Weak transcription NHDF-Ad bronchial
14 chr3:136613600-136625200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr3:136613600-136625200 Weak transcription Ovary ovary
16 chr3:136613600-136625200 Weak transcription Pancreas Pancrea
17 chr3:136613600-136626200 Weak transcription HMEC breast
18 chr3:136613600-136633600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr3:136613600-136638600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr3:136614000-136621000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr3:136614000-136625200 Weak transcription Gastric stomach
22 chr3:136614000-136625200 Weak transcription Spleen Spleen
23 chr3:136614600-136619400 Enhancers Primary T helper cells fromperipheralblood blood
24 chr3:136614600-136622200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr3:136615600-136621200 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr3:136615600-136621400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
27 chr3:136616000-136620800 Enhancers Primary T killer naive cells fromperipheralblood blood
28 chr3:136616200-136619000 Enhancers Primary T helper naive cells fromperipheralblood blood
29 chr3:136616200-136621600 Enhancers Primary T helper naive cells from peripheral blood blood
30 chr3:136617000-136619200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr3:136617200-136619000 Enhancers Primary T cells from cord blood blood
32 chr3:136617200-136619000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr3:136617200-136619200 Genic enhancers Primary hematopoietic stem cells short term culture blood
34 chr3:136617200-136621800 Enhancers HUES64 Cell Line embryonic stem cell
35 chr3:136617600-136621600 Enhancers K562 blood
36 chr3:136617600-136623000 ZNF genes & repeats GM12878-XiMat blood
37 chr3:136617800-136619000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
38 chr3:136617800-136619000 Weak transcription Fetal Muscle Trunk muscle
39 chr3:136617800-136619200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr3:136617800-136619400 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr3:136617800-136622000 Enhancers iPS-15b Cell Line embryonic stem cell
42 chr3:136618000-136619400 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr3:136618200-136619000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr3:136618200-136619200 Weak transcription Primary hematopoietic stem cells blood
45 chr3:136618200-136619200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
46 chr3:136618200-136619800 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr3:136618200-136620200 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr3:136618200-136621000 Weak transcription H1 Cell Line embryonic stem cell
49 chr3:136618200-136621600 Weak transcription Dnd41 blood
50 chr3:136618200-136625200 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015