The 2.0 version of rSNPBase

Variant report

Variant rs28488469
Chromosome Location chr8:90902555-90902556
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:90890200-90904600 Weak transcription Pancreas Pancrea
2 chr8:90893000-90905200 Weak transcription Primary B cells from cord blood blood
3 chr8:90894000-90905800 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr8:90894400-90913400 Weak transcription Duodenum Mucosa Duodenum
5 chr8:90895200-90913800 Weak transcription Brain Angular Gyrus brain
6 chr8:90895400-90904600 Weak transcription Brain Substantia Nigra brain
7 chr8:90895400-90904800 Weak transcription H1 Cell Line embryonic stem cell
8 chr8:90895600-90913600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr8:90895800-90906000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr8:90897600-90903200 Enhancers Hela-S3 cervix
11 chr8:90897600-90914000 Weak transcription Gastric stomach
12 chr8:90898200-90902600 Enhancers Muscle Satellite Cultured Cells --
13 chr8:90898200-90902600 Enhancers NH-A brain
14 chr8:90898600-90902600 Enhancers Primary monocytes fromperipheralblood blood
15 chr8:90898600-90902600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr8:90898600-90902800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr8:90898600-90903200 Enhancers HUES64 Cell Line embryonic stem cell
18 chr8:90898600-90907800 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr8:90898800-90904800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr8:90899200-90902600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
21 chr8:90899200-90913800 Weak transcription Thymus Thymus
22 chr8:90899400-90902600 Enhancers HUVEC blood vessel
23 chr8:90899400-90913800 Weak transcription Small Intestine intestine
24 chr8:90899600-90902600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr8:90899600-90902600 Enhancers HMEC breast
26 chr8:90899600-90902600 Enhancers NHDF-Ad bronchial
27 chr8:90899600-90904800 Weak transcription Primary T cells fromperipheralblood blood
28 chr8:90899600-90905200 Weak transcription Dnd41 blood
29 chr8:90899800-90902600 Enhancers Osteobl bone
30 chr8:90899800-90913600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr8:90900000-90904800 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr8:90900000-90905000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr8:90900200-90904800 Weak transcription Brain Cingulate Gyrus brain
34 chr8:90900400-90902600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr8:90900400-90902600 Enhancers HepG2 liver
36 chr8:90900400-90902600 Enhancers HSMM muscle
37 chr8:90900400-90909000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr8:90900600-90905000 Weak transcription Stomach Smooth Muscle stomach
39 chr8:90900600-90905200 Weak transcription Primary T cells from cord blood blood
40 chr8:90900600-90907800 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr8:90900600-90908000 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr8:90900600-90913400 Weak transcription Liver Liver
43 chr8:90900600-90913800 Weak transcription Brain Hippocampus Middle brain
44 chr8:90900800-90902600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr8:90900800-90904800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr8:90900800-90907800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr8:90900800-90908000 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr8:90900800-90913600 Weak transcription Fetal Lung lung
49 chr8:90900800-90913800 Weak transcription Adipose Nuclei Adipose
50 chr8:90900800-90913800 Weak transcription Fetal Muscle Leg muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015