Variant report
Variant | rs28517350 |
---|---|
Chromosome Location | chr8:60630979-60630980 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs16925214 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17322678 | 1.00[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs17342137 | 1.00[AMR][1000 genomes] |
rs2875935 | 0.83[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs62504698 | 0.82[EUR][1000 genomes] |
rs62504699 | 0.82[EUR][1000 genomes] |
rs62504700 | 0.82[EUR][1000 genomes] |
rs62504701 | 0.82[EUR][1000 genomes] |
rs62504702 | 0.82[EUR][1000 genomes] |
rs62504726 | 0.82[EUR][1000 genomes] |
rs62504727 | 0.82[EUR][1000 genomes] |
rs62504728 | 0.91[EUR][1000 genomes] |
rs62504742 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs62506402 | 1.00[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs62506403 | 1.00[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs62506404 | 0.91[EUR][1000 genomes] |
rs62509972 | 1.00[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs62509973 | 1.00[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs62509975 | 1.00[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs62509976 | 1.00[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs62509977 | 1.00[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs62509989 | 1.00[AMR][1000 genomes] |
rs62510029 | 1.00[AMR][1000 genomes] |
rs62512484 | 1.00[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs62512516 | 1.00[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs62512522 | 1.00[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs62512523 | 1.00[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs6984337 | 0.91[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1030564 | chr8:60445016-60752655 | Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
2 | nsv539630 | chr8:60445016-60752655 | Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:60630600-60631000 | Enhancers | Pancreatic Islets | Pancreatic Islet |
2 | chr8:60630600-60631600 | Enhancers | HUVEC | blood vessel |