Variant report

Variant	rs62504742
Chromosome Location	chr8:60641734-60641735
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs16925214	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17322678	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17342137	1.00[AMR][1000 genomes]
rs28517350	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2875935	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62504698	0.82[EUR][1000 genomes]
rs62504699	1.00[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs62504700	0.82[EUR][1000 genomes]
rs62504701	0.82[EUR][1000 genomes]
rs62504702	0.82[EUR][1000 genomes]
rs62504726	0.82[EUR][1000 genomes]
rs62504727	1.00[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs62504728	0.91[EUR][1000 genomes]
rs62506402	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62506403	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62506404	0.91[EUR][1000 genomes]
rs62509972	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62509973	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62509975	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62509976	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62509977	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62509989	1.00[AMR][1000 genomes]
rs62510029	1.00[AMR][1000 genomes]
rs62512484	1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62512516	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62512522	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62512523	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6984337	0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030564	chr8:60445016-60752655	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv539630	chr8:60445016-60752655	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv890942	chr8:60639357-60686330	Enhancers Weak transcription ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60640800-60642000	Enhancers	Primary B cells from peripheral blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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