Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10104862	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16925082	1.00[ASN][1000 genomes]
rs16925122	1.00[ASN][1000 genomes]
rs16925188	1.00[ASN][1000 genomes]
rs16925214	0.82[EUR][1000 genomes]
rs16925218	0.85[ASN][1000 genomes]
rs28517350	0.82[EUR][1000 genomes]
rs62504698	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62504699	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62504700	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62504702	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62504726	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62504727	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62504728	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62504742	0.82[EUR][1000 genomes]
rs73245952	1.00[ASN][1000 genomes]
rs73245958	1.00[ASN][1000 genomes]
rs73245966	1.00[ASN][1000 genomes]
rs73245972	0.86[ASN][1000 genomes]
rs73680628	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030564	chr8:60445016-60752655	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv539630	chr8:60445016-60752655	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60569800-60573800	Enhancers	Pancreatic Islets	Pancreatic Islet
2	chr8:60571800-60573800	Enhancers	Rectal Smooth Muscle	rectum
3	chr8:60573200-60574000	Enhancers	Stomach Smooth Muscle	stomach

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