Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs13329550	1.00[EUR][1000 genomes]
rs13329560	1.00[EUR][1000 genomes]
rs28386776	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28393049	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28394578	1.00[EUR][1000 genomes]
rs28394758	1.00[EUR][1000 genomes]
rs28433073	1.00[EUR][1000 genomes]
rs28435445	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28459812	1.00[EUR][1000 genomes]
rs28463732	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28523657	1.00[EUR][1000 genomes]
rs28544903	1.00[EUR][1000 genomes]
rs28620978	1.00[EUR][1000 genomes]
rs28623258	1.00[EUR][1000 genomes]
rs28671520	1.00[EUR][1000 genomes]
rs28683177	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28756233	1.00[EUR][1000 genomes]
rs6495043	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7167281	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72739431	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72739432	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8034265	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8036599	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8041362	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9919970	1.00[EUR][1000 genomes]
rs9920142	1.00[EUR][1000 genomes]
rs9920205	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3352103	chr15:73191535-73454001	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv482421	chr15:73279141-73426897	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
3	esv3409112	chr15:73301065-73301613	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:73292800-73301400	Weak transcription	Fetal Stomach	stomach
2	chr15:73298400-73303200	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr15:73299800-73302400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr15:73301200-73303200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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