Variant report

No.	Distal block	Cell Line	Cell type
1	chr15:73307988..73309734-chr15:73311319..73312917,2	K562	blood:
2	chr15:73307241..73310100-chr15:73342597..73345585,3	MCF-7	breast:
3	chr15:73308586..73310099-chr15:73313324..73315028,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000067141	Chromatin interaction

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs13329550	0.83[EUR][1000 genomes]
rs13329560	0.83[EUR][1000 genomes]
rs28386776	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28393049	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28394578	0.83[EUR][1000 genomes]
rs28394758	0.83[EUR][1000 genomes]
rs28433073	0.83[EUR][1000 genomes]
rs28435445	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28459812	0.83[EUR][1000 genomes]
rs28463732	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28523657	0.83[EUR][1000 genomes]
rs28544903	0.83[EUR][1000 genomes]
rs28546255	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28620978	0.83[EUR][1000 genomes]
rs28623258	0.83[EUR][1000 genomes]
rs28671520	0.83[EUR][1000 genomes]
rs28683177	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28756233	0.83[EUR][1000 genomes]
rs6495043	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7167281	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72739431	0.83[EUR][1000 genomes]
rs72739432	0.83[EUR][1000 genomes]
rs8034265	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8041362	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9919970	0.83[EUR][1000 genomes]
rs9920142	0.83[EUR][1000 genomes]
rs9920205	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3352103	chr15:73191535-73454001	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv482421	chr15:73279141-73426897	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:73301800-73310400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr15:73303400-73313200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr15:73303600-73313600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr15:73307400-73312000	Weak transcription	Fetal Brain Female	brain
5	chr15:73307400-73313200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr15:73308200-73309000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr15:73308600-73310000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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