Variant report

Variant rs28598597
Chromosome Location chr7:138251936-138251937
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:138228400-138252600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr7:138235000-138257400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr7:138235800-138253000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr7:138235800-138253200 ZNF genes & repeats Primary hematopoietic stem cells blood
5 chr7:138236000-138254200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr7:138237000-138252400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
7 chr7:138237200-138252600 ZNF genes & repeats Dnd41 blood
8 chr7:138238400-138253600 ZNF genes & repeats Fetal Intestine Small intestine
9 chr7:138238600-138252200 ZNF genes & repeats Primary B cells from peripheral blood blood
10 chr7:138239400-138252600 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
11 chr7:138242600-138272400 Strong transcription iPS-18 Cell Line embryonic stem cell
12 chr7:138246200-138252000 ZNF genes & repeats Primary T cells from cord blood blood
13 chr7:138246800-138252600 ZNF genes & repeats Fetal Lung lung
14 chr7:138246800-138252800 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
15 chr7:138247600-138252000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
16 chr7:138248000-138252000 ZNF genes & repeats Fetal Intestine Large intestine
17 chr7:138248000-138252200 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
18 chr7:138249000-138252400 Genic enhancers Fetal Adrenal Gland Adrenal Gland
19 chr7:138249200-138252400 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr7:138249400-138252400 ZNF genes & repeats A549 lung
21 chr7:138250200-138252000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr7:138250200-138252000 Genic enhancers HepG2 liver
23 chr7:138250200-138252200 Weak transcription Placenta Amnion Placenta Amnion
24 chr7:138250200-138252400 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr7:138250200-138252400 Weak transcription HSMM muscle
26 chr7:138250200-138253800 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr7:138250200-138255200 Weak transcription Hela-S3 cervix
28 chr7:138250200-138255600 Weak transcription Muscle Satellite Cultured Cells --
29 chr7:138250200-138273800 Weak transcription Gastric stomach
30 chr7:138250400-138267600 Weak transcription NHLF lung
31 chr7:138250400-138272000 Weak transcription Small Intestine intestine
32 chr7:138250400-138273000 Strong transcription HUES48 Cell Line embryonic stem cell
33 chr7:138250600-138252000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr7:138250600-138252000 Strong transcription Colonic Mucosa Colon
35 chr7:138250600-138252200 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr7:138250600-138252200 Weak transcription Osteobl bone
37 chr7:138250600-138253000 Weak transcription Aorta Aorta
38 chr7:138250600-138263800 Weak transcription Brain Hippocampus Middle brain
39 chr7:138250600-138264000 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr7:138250600-138270600 Weak transcription Fetal Brain Male brain
41 chr7:138250600-138271800 Weak transcription Right Ventricle heart
42 chr7:138250600-138273000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr7:138250600-138273400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr7:138250800-138252000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr7:138250800-138252000 Weak transcription Brain Inferior Temporal Lobe brain
46 chr7:138250800-138252200 Weak transcription HUVEC blood vessel
47 chr7:138250800-138252400 Genic enhancers Liver Liver
48 chr7:138250800-138252800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr7:138250800-138253000 Strong transcription NH-A brain
50 chr7:138250800-138253800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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