Variant report
| Variant | rs28655743 |
|---|---|
| Chromosome Location | chr6:109783957-109783958 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:109777800-109786800 | Weak transcription | Gastric | stomach |
| 2 | chr6:109777800-109786800 | Weak transcription | Ovary | ovary |
| 3 | chr6:109778000-109786800 | Weak transcription | Pancreas | Pancrea |
| 4 | chr6:109778000-109786800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 5 | chr6:109778200-109784200 | Weak transcription | Fetal Stomach | stomach |
| 6 | chr6:109778200-109785000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 7 | chr6:109778200-109785600 | Weak transcription | Fetal Brain Female | brain |
| 8 | chr6:109778200-109786600 | Weak transcription | Fetal Heart | heart |
| 9 | chr6:109778200-109786800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 10 | chr6:109778200-109786800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 11 | chr6:109778200-109786800 | Weak transcription | Fetal Brain Male | brain |
| 12 | chr6:109778200-109787000 | Weak transcription | Colon Smooth Muscle | Colon |
| 13 | chr6:109778400-109786800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 14 | chr6:109778400-109787000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 15 | chr6:109778400-109791400 | Weak transcription | Colonic Mucosa | Colon |
| 16 | chr6:109778800-109785600 | Weak transcription | Brain Angular Gyrus | brain |
| 17 | chr6:109778800-109786800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 18 | chr6:109778800-109798800 | Weak transcription | Small Intestine | intestine |
| 19 | chr6:109779000-109786600 | Weak transcription | Brain Germinal Matrix | brain |
| 20 | chr6:109779000-109786800 | Weak transcription | Aorta | Aorta |
| 21 | chr6:109779000-109786800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 22 | chr6:109779000-109787000 | Weak transcription | Esophagus | oesophagus |
| 23 | chr6:109779000-109787000 | Weak transcription | Right Atrium | heart |
| 24 | chr6:109779000-109787000 | Weak transcription | Right Ventricle | heart |
| 25 | chr6:109779200-109786800 | Weak transcription | Psoas Muscle | Psoas |
| 26 | chr6:109779400-109786600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 27 | chr6:109779400-109786800 | Weak transcription | Fetal Intestine Small | intestine |
| 28 | chr6:109779600-109785600 | Weak transcription | NHLF | lung |
| 29 | chr6:109780200-109786800 | Weak transcription | Spleen | Spleen |
| 30 | chr6:109780400-109785800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 31 | chr6:109780600-109785600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 32 | chr6:109780600-109785600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 33 | chr6:109780600-109785800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 34 | chr6:109780600-109786400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 35 | chr6:109780600-109800400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 36 | chr6:109780800-109785600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 37 | chr6:109780800-109785600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 38 | chr6:109781000-109785000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 39 | chr6:109781200-109785200 | Weak transcription | Stomach Mucosa | stomach |
| 40 | chr6:109781400-109802200 | Strong transcription | HSMM | muscle |
| 41 | chr6:109781800-109785600 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 42 | chr6:109782000-109784600 | Strong transcription | Primary T cells from cord blood | blood |
| 43 | chr6:109782000-109785000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 44 | chr6:109782000-109785200 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 45 | chr6:109782000-109785600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 46 | chr6:109782000-109798800 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 47 | chr6:109782000-109799000 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 48 | chr6:109782200-109785400 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 49 | chr6:109782200-109788000 | Strong transcription | Primary B cells from cord blood | blood |
| 50 | chr6:109782200-109792400 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
