The 2.0 version of rSNPBase

Variant report

Variant rs28808149
Chromosome Location chr19:19509808-19509809
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19497600-19515800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr19:19498000-19510400 Weak transcription A549 lung
3 chr19:19498000-19510400 Weak transcription NHDF-Ad bronchial
4 chr19:19498000-19515600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr19:19498200-19510400 Weak transcription Fetal Stomach stomach
6 chr19:19498400-19513600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr19:19499800-19510400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr19:19500200-19510400 Weak transcription Brain Hippocampus Middle brain
9 chr19:19500400-19515400 Weak transcription Fetal Heart heart
10 chr19:19500600-19510400 Weak transcription Fetal Kidney kidney
11 chr19:19500600-19515800 Weak transcription Right Ventricle heart
12 chr19:19501200-19514000 Weak transcription Pancreas Pancrea
13 chr19:19501400-19511000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr19:19501400-19513600 Weak transcription Psoas Muscle Psoas
15 chr19:19501400-19513800 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr19:19501800-19510800 Weak transcription Brain Substantia Nigra brain
17 chr19:19502600-19510400 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr19:19504600-19510400 Weak transcription Fetal Lung lung
19 chr19:19505600-19514200 Weak transcription Small Intestine intestine
20 chr19:19505800-19510000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr19:19505800-19513800 Weak transcription Stomach Mucosa stomach
22 chr19:19506000-19510000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr19:19506000-19510000 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr19:19506000-19510200 Weak transcription NHLF lung
25 chr19:19506000-19510400 Weak transcription Muscle Satellite Cultured Cells --
26 chr19:19506000-19510400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr19:19506000-19510600 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr19:19506000-19510600 Weak transcription Fetal Muscle Leg muscle
29 chr19:19506000-19510600 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr19:19506000-19510600 Weak transcription Thymus Thymus
31 chr19:19506000-19510800 Weak transcription HMEC breast
32 chr19:19506000-19511000 Weak transcription Fetal Muscle Trunk muscle
33 chr19:19506000-19511000 Weak transcription Right Atrium heart
34 chr19:19506000-19512800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr19:19506000-19513600 Weak transcription Hela-S3 cervix
36 chr19:19506000-19513600 Weak transcription HepG2 liver
37 chr19:19506000-19513800 Weak transcription Primary B cells from cord blood blood
38 chr19:19506000-19513800 Weak transcription Fetal Intestine Large intestine
39 chr19:19506000-19514000 Weak transcription Esophagus oesophagus
40 chr19:19506000-19515600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr19:19506000-19515800 Weak transcription Colonic Mucosa Colon
42 chr19:19506000-19515800 Weak transcription Left Ventricle heart
43 chr19:19506200-19510200 Weak transcription HUVEC blood vessel
44 chr19:19506200-19510400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr19:19506200-19510400 Weak transcription Brain Anterior Caudate brain
46 chr19:19506200-19510600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr19:19506200-19510600 Weak transcription Liver Liver
48 chr19:19506200-19510600 Weak transcription HSMMtube muscle
49 chr19:19506200-19511000 Weak transcription Lung lung
50 chr19:19506200-19513800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015