The 2.0 version of rSNPBase

Variant report

Variant rs59432787
Chromosome Location chr19:19563011-19563012
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19522200-19563400 Weak transcription Placenta Amnion Placenta Amnion
2 chr19:19544400-19563400 Weak transcription Fetal Kidney kidney
3 chr19:19545600-19568600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr19:19545800-19563400 Weak transcription Rectal Smooth Muscle rectum
5 chr19:19545800-19568600 Weak transcription Brain Substantia Nigra brain
6 chr19:19545800-19570600 Weak transcription Brain Cingulate Gyrus brain
7 chr19:19546000-19566600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr19:19546200-19569000 Weak transcription Colon Smooth Muscle Colon
9 chr19:19551000-19571200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr19:19553400-19564400 Enhancers Primary T killer naive cells fromperipheralblood blood
11 chr19:19553400-19564800 Enhancers Primary T helper cells fromperipheralblood blood
12 chr19:19554000-19564000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
13 chr19:19554200-19564600 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr19:19555200-19565800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr19:19556000-19567400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr19:19556200-19567400 Weak transcription Osteobl bone
17 chr19:19557400-19567200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr19:19557600-19568600 Weak transcription HUVEC blood vessel
19 chr19:19557600-19569000 Weak transcription NH-A brain
20 chr19:19557800-19564000 Enhancers Left Ventricle heart
21 chr19:19557800-19567400 Weak transcription HepG2 liver
22 chr19:19557800-19569400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr19:19558000-19564400 Enhancers Fetal Muscle Trunk muscle
24 chr19:19558200-19564400 Enhancers Fetal Muscle Leg muscle
25 chr19:19558200-19567000 Weak transcription Dnd41 blood
26 chr19:19558200-19567000 Weak transcription Hela-S3 cervix
27 chr19:19558200-19571400 Weak transcription Brain Germinal Matrix brain
28 chr19:19558400-19568600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr19:19558600-19567400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr19:19558600-19570400 Weak transcription HMEC breast
31 chr19:19558800-19567000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr19:19558800-19567000 Weak transcription HSMMtube muscle
33 chr19:19558800-19568800 Weak transcription iPS-20b Cell Line embryonic stem cell
34 chr19:19558800-19569600 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr19:19559000-19566600 Weak transcription Placenta Placenta
36 chr19:19559000-19567000 Weak transcription NHLF lung
37 chr19:19559000-19567400 Weak transcription HSMM muscle
38 chr19:19559000-19567600 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr19:19559000-19567600 Weak transcription Stomach Smooth Muscle stomach
40 chr19:19559000-19568600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr19:19559000-19569200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr19:19559200-19568000 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr19:19559200-19570600 Weak transcription Fetal Brain Female brain
44 chr19:19559400-19568600 Weak transcription Muscle Satellite Cultured Cells --
45 chr19:19559400-19569000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr19:19560000-19563400 Weak transcription Fetal Stomach stomach
47 chr19:19560000-19564000 Enhancers Skeletal Muscle Male skeletal muscle
48 chr19:19560000-19564400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr19:19560200-19563400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr19:19560200-19567200 Weak transcription NHEK skin

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Last update: Aug 31, 2015