The 2.0 version of rSNPBase

Variant report

Variant rs56786913
Chromosome Location chr19:19528669-19528670
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19518600-19529400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
2 chr19:19518600-19549800 Weak transcription Fetal Brain Female brain
3 chr19:19520600-19529200 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr19:19520800-19528800 Weak transcription Primary B cells from cord blood blood
5 chr19:19520800-19546800 Weak transcription Hela-S3 cervix
6 chr19:19521000-19529000 Weak transcription H9 Cell Line embryonic stem cell
7 chr19:19521000-19545400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr19:19521400-19528800 Weak transcription Primary hematopoietic stem cells blood
9 chr19:19521600-19529800 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr19:19521600-19530000 Weak transcription Rectal Smooth Muscle rectum
11 chr19:19521600-19531600 Weak transcription Brain Anterior Caudate brain
12 chr19:19521800-19529600 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr19:19521800-19536200 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr19:19521800-19537600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr19:19522000-19531800 Weak transcription HepG2 liver
16 chr19:19522000-19545000 Weak transcription Fetal Lung lung
17 chr19:19522200-19529000 Weak transcription Colonic Mucosa Colon
18 chr19:19522200-19529000 Weak transcription Monocytes-CD14+_RO01746 blood
19 chr19:19522200-19529800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr19:19522200-19531800 Weak transcription Fetal Intestine Large intestine
21 chr19:19522200-19534600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr19:19522200-19548600 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr19:19522200-19563400 Weak transcription Placenta Amnion Placenta Amnion
24 chr19:19522400-19528800 Weak transcription NHLF lung
25 chr19:19522400-19529000 Weak transcription Colon Smooth Muscle Colon
26 chr19:19522600-19533200 Weak transcription Aorta Aorta
27 chr19:19522600-19533600 Weak transcription Fetal Stomach stomach
28 chr19:19522600-19537600 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr19:19522800-19529800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr19:19524200-19531600 Weak transcription NHEK skin
31 chr19:19525200-19531600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr19:19525400-19529000 Weak transcription Primary monocytes fromperipheralblood blood
33 chr19:19525400-19538200 Enhancers Primary T cells fromperipheralblood blood
34 chr19:19526400-19530000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr19:19526400-19535000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
36 chr19:19526600-19530400 Enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr19:19526600-19530400 Enhancers Primary T killer naive cells fromperipheralblood blood
38 chr19:19526600-19530800 Enhancers Primary T helper cells fromperipheralblood blood
39 chr19:19526600-19531800 Enhancers Primary T helper naive cells fromperipheralblood blood
40 chr19:19526600-19531800 Enhancers Skeletal Muscle Female skeletal muscle
41 chr19:19526600-19533400 Enhancers Primary T killer memory cells from peripheral blood blood
42 chr19:19526600-19533600 Enhancers Primary T helper cells PMA-I stimulated --
43 chr19:19526800-19528800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr19:19526800-19530200 Enhancers Psoas Muscle Psoas
45 chr19:19527000-19529600 Enhancers Liver Liver
46 chr19:19527000-19530200 Genic enhancers Primary hematopoietic stem cells short term culture blood
47 chr19:19527000-19530800 Enhancers Left Ventricle heart
48 chr19:19527000-19530800 Enhancers Pancreas Pancrea
49 chr19:19527000-19533200 Enhancers Primary B cells from peripheral blood blood
50 chr19:19527000-19534400 Enhancers Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015