The 2.0 version of rSNPBase

Variant report

Variant rs28817677
Chromosome Location chr15:72348390-72348391
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:72282800-72349800 Weak transcription Brain Hippocampus Middle brain
2 chr15:72300000-72351000 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr15:72301000-72361200 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr15:72302200-72349400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr15:72328400-72349800 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr15:72330000-72349800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr15:72330000-72349800 Weak transcription Duodenum Mucosa Duodenum
8 chr15:72333200-72353800 Weak transcription Primary T cells fromperipheralblood blood
9 chr15:72334000-72355000 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr15:72334400-72350000 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr15:72337000-72349800 Weak transcription Colon Smooth Muscle Colon
12 chr15:72338800-72349800 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr15:72338800-72349800 Weak transcription Adipose Nuclei Adipose
14 chr15:72338800-72349800 Weak transcription Liver Liver
15 chr15:72338800-72349800 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr15:72338800-72349800 Weak transcription Small Intestine intestine
17 chr15:72338800-72349800 Weak transcription A549 lung
18 chr15:72338800-72349800 Weak transcription HSMM muscle
19 chr15:72338800-72350000 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr15:72338800-72350200 Weak transcription Primary T cells from cord blood blood
21 chr15:72338800-72352800 Weak transcription Left Ventricle heart
22 chr15:72338800-72353000 Weak transcription Placenta Placenta
23 chr15:72339000-72352800 Weak transcription Ovary ovary
24 chr15:72339000-72353000 Weak transcription Stomach Smooth Muscle stomach
25 chr15:72339000-72353600 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr15:72339000-72363400 Weak transcription Primary B cells from cord blood blood
27 chr15:72339800-72350000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr15:72339800-72350000 Weak transcription NH-A brain
29 chr15:72340000-72349800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr15:72342000-72349800 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr15:72342000-72349800 Weak transcription Fetal Kidney kidney
32 chr15:72342000-72352800 Weak transcription Right Atrium heart
33 chr15:72342200-72349800 Weak transcription Brain Substantia Nigra brain
34 chr15:72342200-72350200 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr15:72342400-72350000 Weak transcription Psoas Muscle Psoas
36 chr15:72342400-72350200 Weak transcription Fetal Lung lung
37 chr15:72342600-72349800 Weak transcription Brain Anterior Caudate brain
38 chr15:72342800-72352800 Weak transcription Thymus Thymus
39 chr15:72343200-72350000 Weak transcription NHDF-Ad bronchial
40 chr15:72343400-72349800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr15:72343600-72349800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr15:72343600-72349800 Weak transcription Osteobl bone
43 chr15:72343800-72350000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr15:72343800-72353200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr15:72344000-72355200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr15:72344200-72350000 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr15:72344400-72353000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr15:72344400-72353600 Weak transcription Fetal Muscle Trunk muscle
49 chr15:72344800-72353200 Weak transcription Lung lung
50 chr15:72345000-72350000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015