The 2.0 version of rSNPBase

Variant report

Variant rs28583168
Chromosome Location chr15:72380480-72380481
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:72351200-72395800 Weak transcription Rectal Smooth Muscle rectum
2 chr15:72361600-72390600 Weak transcription Aorta Aorta
3 chr15:72361600-72391400 Weak transcription Ovary ovary
4 chr15:72367200-72407600 Weak transcription Stomach Smooth Muscle stomach
5 chr15:72372200-72399400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr15:72373600-72394400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr15:72375000-72408200 Weak transcription Primary B cells from cord blood blood
8 chr15:72375800-72395600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr15:72376400-72381400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr15:72377200-72388200 Weak transcription Fetal Brain Female brain
11 chr15:72377600-72381800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr15:72377800-72380600 Weak transcription NHLF lung
13 chr15:72377800-72397600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr15:72378400-72383600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr15:72378400-72388400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr15:72378400-72388600 Weak transcription Fetal Lung lung
17 chr15:72378800-72391400 Weak transcription Primary hematopoietic stem cells blood
18 chr15:72378800-72393200 Weak transcription Fetal Intestine Large intestine
19 chr15:72378800-72395800 Weak transcription Colon Smooth Muscle Colon
20 chr15:72379000-72388600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr15:72379000-72388600 Weak transcription Fetal Muscle Leg muscle
22 chr15:72379000-72395600 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr15:72379000-72407800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr15:72379200-72393200 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr15:72379200-72395600 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr15:72379400-72383600 Weak transcription HSMM muscle
27 chr15:72379400-72385200 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr15:72379600-72381000 Strong transcription Primary T cells from cord blood blood
29 chr15:72379600-72381000 Weak transcription Esophagus oesophagus
30 chr15:72379600-72382800 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr15:72379600-72388400 Weak transcription Fetal Intestine Small intestine
32 chr15:72379800-72382600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr15:72379800-72384400 Weak transcription Stomach Mucosa stomach
34 chr15:72379800-72388400 Weak transcription Fetal Muscle Trunk muscle
35 chr15:72379800-72391000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr15:72379800-72406200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr15:72380000-72380600 Weak transcription Brain Germinal Matrix brain
38 chr15:72380000-72380600 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr15:72380000-72381000 Weak transcription Gastric stomach
40 chr15:72380000-72384800 Weak transcription Left Ventricle heart
41 chr15:72380000-72388200 Weak transcription Fetal Stomach stomach
42 chr15:72380000-72407600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr15:72380200-72380600 Weak transcription Psoas Muscle Psoas
44 chr15:72380200-72386000 Weak transcription Right Ventricle heart
45 chr15:72380200-72388600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr15:72380200-72395600 Weak transcription Brain Anterior Caudate brain
47 chr15:72380200-72395600 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr15:72380400-72384400 Weak transcription Fetal Heart heart
49 chr15:72380400-72390400 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr15:72380400-72390400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015