The 2.0 version of rSNPBase

Variant report

Variant rs28552371
Chromosome Location chr15:72334399-72334400
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:72226800-72343600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr15:72280200-72338800 Weak transcription Hela-S3 cervix
3 chr15:72282000-72341800 Weak transcription Brain Angular Gyrus brain
4 chr15:72282200-72337800 Weak transcription Esophagus oesophagus
5 chr15:72282200-72338800 Weak transcription Brain Inferior Temporal Lobe brain
6 chr15:72282800-72347000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr15:72282800-72349800 Weak transcription Brain Hippocampus Middle brain
8 chr15:72289200-72337800 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr15:72292200-72338200 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr15:72295400-72337800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr15:72298400-72344000 Weak transcription Spleen Spleen
12 chr15:72300000-72338000 Weak transcription Stomach Smooth Muscle stomach
13 chr15:72300000-72351000 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr15:72300200-72341800 Weak transcription Brain Substantia Nigra brain
15 chr15:72300400-72338200 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr15:72300600-72338000 Weak transcription Liver Liver
17 chr15:72301000-72341800 Weak transcription Brain Anterior Caudate brain
18 chr15:72301000-72361200 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr15:72302200-72349400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr15:72302800-72337800 Weak transcription HSMM muscle
21 chr15:72308000-72335200 Weak transcription Aorta Aorta
22 chr15:72311600-72341800 Weak transcription Fetal Kidney kidney
23 chr15:72313400-72337800 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr15:72314000-72338000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr15:72314000-72338200 Weak transcription Adipose Nuclei Adipose
26 chr15:72315800-72338200 Weak transcription Small Intestine intestine
27 chr15:72316400-72337800 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr15:72323600-72338000 Weak transcription Thymus Thymus
29 chr15:72324400-72338000 Weak transcription Fetal Intestine Large intestine
30 chr15:72326400-72334600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr15:72326600-72338000 Weak transcription HUVEC blood vessel
32 chr15:72326600-72340000 Weak transcription Placenta Amnion Placenta Amnion
33 chr15:72326600-72341000 Weak transcription NHLF lung
34 chr15:72326600-72341800 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr15:72326600-72342200 Weak transcription Fetal Brain Male brain
36 chr15:72326600-72343600 Weak transcription Right Ventricle heart
37 chr15:72326800-72334800 Weak transcription Muscle Satellite Cultured Cells --
38 chr15:72326800-72338200 Weak transcription NHDF-Ad bronchial
39 chr15:72328400-72338600 Weak transcription HepG2 liver
40 chr15:72328400-72349800 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr15:72329000-72339000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr15:72329200-72339200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr15:72329400-72337800 Weak transcription Lung lung
44 chr15:72329400-72338000 Weak transcription Primary monocytes fromperipheralblood blood
45 chr15:72329800-72338200 Weak transcription A549 lung
46 chr15:72329800-72339400 Weak transcription NH-A brain
47 chr15:72329800-72340000 Weak transcription Primary hematopoietic stem cells blood
48 chr15:72330000-72337800 Weak transcription Placenta Placenta
49 chr15:72330000-72338000 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr15:72330000-72343400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015