Variant report
| Variant | rs28836871 |
|---|---|
| Chromosome Location | chr8:49876281-49876282 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:32)
| rs_ID | r2[population] |
|---|---|
| rs10088848 | 0.85[AMR][1000 genomes] |
| rs10091785 | 0.85[AMR][1000 genomes] |
| rs10093573 | 0.85[AMR][1000 genomes] |
| rs10113231 | 0.85[AMR][1000 genomes] |
| rs11987212 | 0.87[AFR][1000 genomes];0.85[AMR][1000 genomes] |
| rs12334368 | 0.85[AMR][1000 genomes] |
| rs12679730 | 0.85[AMR][1000 genomes] |
| rs16938987 | 1.00[AMR][1000 genomes] |
| rs16939033 | 0.85[AMR][1000 genomes] |
| rs16939049 | 0.85[AMR][1000 genomes] |
| rs16939100 | 0.97[AFR][1000 genomes];0.85[AMR][1000 genomes] |
| rs28537094 | 0.85[AMR][1000 genomes] |
| rs28636874 | 0.85[AMR][1000 genomes] |
| rs28668860 | 1.00[AMR][1000 genomes] |
| rs28750315 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs28776510 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs56255608 | 0.95[AFR][1000 genomes];0.85[AMR][1000 genomes] |
| rs59367437 | 0.85[AMR][1000 genomes] |
| rs6999256 | 0.84[AMR][1000 genomes] |
| rs7009872 | 0.85[AMR][1000 genomes] |
| rs73577412 | 0.85[AMR][1000 genomes] |
| rs73577459 | 1.00[AMR][1000 genomes] |
| rs73577461 | 1.00[AMR][1000 genomes] |
| rs73577462 | 1.00[AMR][1000 genomes] |
| rs73577463 | 1.00[AMR][1000 genomes] |
| rs73577464 | 1.00[AMR][1000 genomes] |
| rs73680733 | 0.85[AMR][1000 genomes] |
| rs73680742 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73680744 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73680746 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7460794 | 0.85[AMR][1000 genomes] |
| rs9886604 | 0.85[AMR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr8:49875400-49876600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
