Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49758119..49760348-chr8:49762512..49764848,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10087909	1.00[MEX][hapmap]
rs10093573	1.00[AMR][1000 genomes]
rs10103620	1.00[MEX][hapmap]
rs10113231	1.00[AMR][1000 genomes]
rs12334368	1.00[AMR][1000 genomes]
rs12679730	1.00[AMR][1000 genomes]
rs16938569	1.00[MEX][hapmap]
rs16938743	1.00[MEX][hapmap]
rs16938987	1.00[ASW][hapmap];1.00[MEX][hapmap];0.85[AMR][1000 genomes]
rs28506917	0.86[AMR][1000 genomes]
rs28513268	0.93[AMR][1000 genomes]
rs28615528	0.93[AMR][1000 genomes]
rs28668860	0.85[AMR][1000 genomes]
rs28750315	0.85[AMR][1000 genomes]
rs28776510	0.85[AMR][1000 genomes]
rs28836871	0.85[AMR][1000 genomes]
rs59367437	1.00[AMR][1000 genomes]
rs6472030	1.00[MEX][hapmap]
rs6472036	1.00[MEX][hapmap]
rs6989173	1.00[MEX][hapmap]
rs6999204	1.00[MEX][hapmap]
rs6999256	0.84[AMR][1000 genomes]
rs73577407	0.81[AMR][1000 genomes]
rs73577412	1.00[AMR][1000 genomes]
rs73577428	0.93[AMR][1000 genomes]
rs73577431	0.93[AMR][1000 genomes]
rs73577459	0.85[AMR][1000 genomes]
rs73577461	0.85[AMR][1000 genomes]
rs73577462	0.85[AMR][1000 genomes]
rs73577463	0.85[AMR][1000 genomes]
rs73577464	0.85[AMR][1000 genomes]
rs73680742	0.85[AMR][1000 genomes]
rs73680744	0.85[AMR][1000 genomes]
rs73680746	0.85[AMR][1000 genomes]
rs7460794	1.00[AMR][1000 genomes]
rs7814104	0.88[YRI][hapmap];0.80[AFR][1000 genomes];0.92[AMR][1000 genomes]
rs7827154	1.00[MEX][hapmap]
rs9886604	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890854	chr8:49738821-49838908	Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49752000-49758600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr8:49754800-49761200	Weak transcription	Fetal Lung	lung
3	chr8:49755400-49759800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:49755400-49760000	Weak transcription	Brain Germinal Matrix	brain
5	chr8:49755400-49760200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr8:49757800-49758600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr8:49758000-49758600	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr8:49758200-49759400	Weak transcription	HUES64 Cell Line	embryonic stem cell

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