Variant report

Variant	rs12334368
Chromosome Location	chr8:49736097-49736098
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49731173..49733390-chr8:49734247..49736460,2	K562	blood:
2	chr8:49731173..49733186-chr8:49734247..49736203,2	K562	blood:

Extended variants
information (count: 85 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:85)

rs_ID	r²[population]
rs10087585	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10087909	1.00[CHD][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10088320	0.90[ASN][1000 genomes]
rs10088848	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10091785	1.00[EUR][1000 genomes]
rs10093573	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10095974	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10096121	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10096124	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10103620	1.00[MEX][hapmap]
rs10109962	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10113231	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10113574	1.00[EUR][1000 genomes]
rs10504067	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs12679730	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16938569	1.00[MEX][hapmap]
rs16938671	1.00[EUR][1000 genomes]
rs16938732	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16938733	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16938743	1.00[CHD][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16938987	0.85[ASW][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16938995	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16939033	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16939049	1.00[EUR][1000 genomes]
rs2062114	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28376220	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28478726	1.00[EUR][1000 genomes]
rs28489723	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28506917	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28513268	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28537094	1.00[EUR][1000 genomes]
rs28549334	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28615528	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28620405	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28636874	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28668860	0.85[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs28750315	0.85[AMR][1000 genomes]
rs28776510	0.85[AMR][1000 genomes]
rs28810807	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28836871	0.85[AMR][1000 genomes]
rs4582590	1.00[MEX][hapmap]
rs56712301	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs58148301	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs59367437	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6472028	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6472029	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6472030	1.00[CHD][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6472036	1.00[CHD][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6982290	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6982783	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6989173	1.00[CHD][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6999204	1.00[MEX][hapmap]
rs6999256	0.84[AMR][1000 genomes]
rs6999874	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7003481	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7007772	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7009872	1.00[AMR][1000 genomes]
rs7011713	1.00[EUR][1000 genomes]
rs73575632	1.00[EUR][1000 genomes]
rs73575652	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73575695	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73575698	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73575700	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73577407	0.81[AMR][1000 genomes]
rs73577412	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73577428	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73577431	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73577459	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73577461	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73577462	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73577463	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73577464	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73680733	1.00[EUR][1000 genomes]
rs73680742	0.85[AMR][1000 genomes]
rs73680744	0.85[AMR][1000 genomes]
rs73680746	0.85[AMR][1000 genomes]
rs7460794	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7814104	0.92[AMR][1000 genomes]
rs7827154	1.00[MEX][hapmap]
rs7838382	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7840259	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs922803	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs975744	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9773582	1.00[EUR][1000 genomes]
rs9886604	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49731000-49740200	Weak transcription	HSMMtube	muscle
2	chr8:49731200-49736400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr8:49731200-49736400	Weak transcription	NHDF-Ad	bronchial
4	chr8:49731200-49736600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr8:49731200-49736600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr8:49731200-49736600	Weak transcription	Osteobl	bone
7	chr8:49731200-49738000	Weak transcription	Spleen	Spleen
8	chr8:49731800-49736600	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr8:49731800-49736800	Weak transcription	HSMM	muscle
10	chr8:49731800-49738600	Weak transcription	NH-A	brain
11	chr8:49732800-49736600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr8:49732800-49736800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr8:49733400-49736600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr8:49733800-49736600	Weak transcription	Fetal Lung	lung
15	chr8:49734000-49738600	Weak transcription	Fetal Muscle Leg	muscle
16	chr8:49734000-49748200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr8:49734400-49737600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr8:49734600-49742400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr8:49734600-49747800	Weak transcription	NHEK	skin
20	chr8:49734800-49736600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr8:49734800-49738600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr8:49736000-49739000	Enhancers	NHLF	lung

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