Variant report
Variant | rs73577428 |
---|---|
Chromosome Location | chr8:49745475-49745476 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
1
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rs_ID | r2[population] |
---|---|
rs10087585 | 1.00[EUR][1000 genomes] |
rs10087909 | 1.00[EUR][1000 genomes] |
rs10088848 | 1.00[EUR][1000 genomes] |
rs10091785 | 1.00[EUR][1000 genomes] |
rs10093573 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs10095974 | 1.00[EUR][1000 genomes] |
rs10096121 | 1.00[EUR][1000 genomes] |
rs10096124 | 1.00[EUR][1000 genomes] |
rs10109962 | 1.00[EUR][1000 genomes] |
rs10113231 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs10113574 | 1.00[EUR][1000 genomes] |
rs10504067 | 1.00[EUR][1000 genomes] |
rs12334368 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs12679730 | 0.93[AMR][1000 genomes] |
rs16938671 | 1.00[EUR][1000 genomes] |
rs16938732 | 1.00[EUR][1000 genomes] |
rs16938733 | 1.00[EUR][1000 genomes] |
rs16938743 | 1.00[EUR][1000 genomes] |
rs16938987 | 1.00[EUR][1000 genomes] |
rs16938995 | 1.00[EUR][1000 genomes] |
rs16939033 | 1.00[EUR][1000 genomes] |
rs16939049 | 1.00[EUR][1000 genomes] |
rs2062114 | 1.00[EUR][1000 genomes] |
rs28376220 | 1.00[EUR][1000 genomes] |
rs28478726 | 1.00[EUR][1000 genomes] |
rs28489723 | 1.00[EUR][1000 genomes] |
rs28506917 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs28513268 | 0.86[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs28537094 | 1.00[EUR][1000 genomes] |
rs28549334 | 1.00[EUR][1000 genomes] |
rs28615528 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs28620405 | 1.00[EUR][1000 genomes] |
rs28636874 | 1.00[EUR][1000 genomes] |
rs28810807 | 1.00[EUR][1000 genomes] |
rs56712301 | 1.00[EUR][1000 genomes] |
rs58148301 | 1.00[EUR][1000 genomes] |
rs59367437 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs6472028 | 1.00[EUR][1000 genomes] |
rs6472029 | 1.00[EUR][1000 genomes] |
rs6472030 | 1.00[EUR][1000 genomes] |
rs6472036 | 1.00[EUR][1000 genomes] |
rs6982290 | 1.00[EUR][1000 genomes] |
rs6982783 | 1.00[EUR][1000 genomes] |
rs6989173 | 1.00[EUR][1000 genomes] |
rs6999874 | 1.00[EUR][1000 genomes] |
rs7003481 | 1.00[EUR][1000 genomes] |
rs7007772 | 1.00[EUR][1000 genomes] |
rs7009872 | 0.93[AMR][1000 genomes] |
rs7011713 | 1.00[EUR][1000 genomes] |
rs73575632 | 1.00[EUR][1000 genomes] |
rs73575652 | 1.00[EUR][1000 genomes] |
rs73575695 | 1.00[EUR][1000 genomes] |
rs73575698 | 1.00[EUR][1000 genomes] |
rs73575700 | 1.00[EUR][1000 genomes] |
rs73577407 | 0.87[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs73577412 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73577431 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs73577459 | 1.00[EUR][1000 genomes] |
rs73577461 | 1.00[EUR][1000 genomes] |
rs73577462 | 1.00[EUR][1000 genomes] |
rs73577463 | 1.00[EUR][1000 genomes] |
rs73577464 | 1.00[EUR][1000 genomes] |
rs73680733 | 1.00[EUR][1000 genomes] |
rs7460794 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7464556 | 1.00[ASN][1000 genomes] |
rs7814104 | 0.85[AMR][1000 genomes] |
rs7819484 | 1.00[ASN][1000 genomes] |
rs7838382 | 1.00[EUR][1000 genomes] |
rs7840259 | 1.00[EUR][1000 genomes] |
rs922803 | 1.00[EUR][1000 genomes] |
rs9657079 | 1.00[ASN][1000 genomes] |
rs975744 | 1.00[EUR][1000 genomes] |
rs9773582 | 1.00[EUR][1000 genomes] |
rs9886604 | 0.93[AMR][1000 genomes];1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv890854 | chr8:49738821-49838908 | Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 4 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:49734000-49748200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
2 | chr8:49734600-49747800 | Weak transcription | NHEK | skin |
3 | chr8:49737600-49747800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
4 | chr8:49740800-49746000 | Weak transcription | Fetal Lung | lung |
5 | chr8:49744800-49746600 | Weak transcription | Fetal Muscle Trunk | muscle |