Variant report

Variant	rs2902340
Chromosome Location	chr10:44497495-44497496
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44491930..44494556-chr10:44497105..44500011,2	K562	blood:
2	chr10:44495582..44498780-chr10:44499655..44502319,3	K562	blood:

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10736825	0.82[ASN][1000 genomes]
rs10793510	0.94[ASN][1000 genomes]
rs10793512	0.97[ASN][1000 genomes]
rs10793518	0.83[ASN][1000 genomes]
rs10899960	0.94[ASN][1000 genomes]
rs10899962	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10899967	0.87[ASN][1000 genomes]
rs10899968	0.83[ASN][1000 genomes]
rs12573239	0.95[ASN][1000 genomes]
rs1388975	0.82[ASN][1000 genomes]
rs1492711	0.82[ASN][1000 genomes]
rs1565660	0.82[ASN][1000 genomes]
rs1602716	0.82[ASN][1000 genomes]
rs1891883	0.82[ASN][1000 genomes]
rs2051120	0.82[ASN][1000 genomes]
rs2185946	0.82[ASN][1000 genomes]
rs2185947	0.82[ASN][1000 genomes]
rs2279555	0.91[ASN][1000 genomes]
rs2624688	0.81[ASN][1000 genomes]
rs2902339	0.82[ASN][1000 genomes]
rs4615977	0.82[ASN][1000 genomes]
rs4948593	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4948594	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4948595	0.95[ASN][1000 genomes]
rs4948596	0.83[ASN][1000 genomes]
rs4948803	0.94[ASN][1000 genomes]
rs4948808	0.97[ASN][1000 genomes]
rs4948809	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4948811	0.82[ASN][1000 genomes]
rs4948812	0.95[ASN][1000 genomes]
rs4948816	0.83[ASN][1000 genomes]
rs4948817	0.83[ASN][1000 genomes]
rs4948820	0.82[ASN][1000 genomes]
rs4997087	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6593377	0.94[ASN][1000 genomes]
rs6593384	0.82[ASN][1000 genomes]
rs6593385	0.89[ASN][1000 genomes]
rs6593388	0.82[ASN][1000 genomes]
rs6593392	0.82[ASN][1000 genomes]
rs6593393	0.82[ASN][1000 genomes]
rs6593394	0.82[ASN][1000 genomes]
rs7074248	0.95[ASN][1000 genomes]
rs7084564	0.95[ASN][1000 genomes]
rs7903881	0.82[ASN][1000 genomes]
rs7908336	0.94[ASN][1000 genomes]
rs7917534	0.82[ASN][1000 genomes]
rs7919657	0.80[ASN][1000 genomes]
rs7922924	0.88[ASN][1000 genomes]
rs7923335	0.95[ASN][1000 genomes]
rs955582	0.82[ASN][1000 genomes]
rs955583	0.82[ASN][1000 genomes]
rs988738	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv466884	chr10:44473036-44515130	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv550698	chr10:44473036-44515130	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44494200-44502600	Weak transcription	Right Atrium	heart
2	chr10:44494600-44499200	Weak transcription	NHDF-Ad	bronchial
3	chr10:44495800-44504400	Weak transcription	Pancreas	Pancrea

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