Variant report

Variant	rs6593394
Chromosome Location	chr10:44535508-44535509
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10736825	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10793518	0.99[ASN][1000 genomes]
rs10899962	0.82[ASN][1000 genomes]
rs10899967	0.94[ASN][1000 genomes]
rs10899968	0.99[ASN][1000 genomes]
rs12412267	0.97[ASN][1000 genomes]
rs12415001	0.96[ASN][1000 genomes]
rs12573239	0.86[ASN][1000 genomes]
rs1388975	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1492711	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1565660	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1602716	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1891883	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2051120	1.00[ASN][1000 genomes]
rs2185946	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2185947	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2624688	0.99[ASN][1000 genomes]
rs2902339	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2902340	0.82[ASN][1000 genomes]
rs4615977	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4948595	0.86[ASN][1000 genomes]
rs4948596	0.90[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs4948812	0.86[ASN][1000 genomes]
rs4948816	0.90[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs4948817	0.90[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs4948819	0.82[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs4948820	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4997087	0.82[ASN][1000 genomes]
rs6593388	1.00[ASN][1000 genomes]
rs6593392	1.00[ASN][1000 genomes]
rs6593393	1.00[ASN][1000 genomes]
rs7074248	0.86[ASN][1000 genomes]
rs7084564	0.86[ASN][1000 genomes]
rs7903881	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7917534	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7919657	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7922924	0.85[ASN][1000 genomes]
rs7923335	0.86[ASN][1000 genomes]
rs955582	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs955583	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44511800-44537600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44532400-44537200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr10:44534800-44536400	Enhancers	Osteobl	bone
4	chr10:44535000-44535600	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr10:44535000-44535600	Enhancers	NH-A	brain
6	chr10:44535000-44535800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr10:44535400-44535800	Enhancers	Liver	Liver
8	chr10:44535400-44541400	Weak transcription	Pancreas	Pancrea

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