The 2.0 version of rSNPBase

Variant report

Variant rs3013455
Chromosome Location chr1:214532811-214532812
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214493000-214534600 Weak transcription Brain Inferior Temporal Lobe brain
2 chr1:214503200-214537800 Weak transcription Gastric stomach
3 chr1:214504600-214533200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:214508400-214535000 Weak transcription Esophagus oesophagus
5 chr1:214512000-214537000 Weak transcription Rectal Smooth Muscle rectum
6 chr1:214513600-214552200 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:214514000-214537800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr1:214515400-214542600 Weak transcription Brain Substantia Nigra brain
9 chr1:214518400-214537800 Weak transcription Fetal Brain Male brain
10 chr1:214519000-214533800 Weak transcription Duodenum Mucosa Duodenum
11 chr1:214519000-214557800 Weak transcription Dnd41 blood
12 chr1:214519200-214577200 Weak transcription Primary hematopoietic stem cells blood
13 chr1:214521200-214537600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:214522800-214552800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr1:214523400-214540800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr1:214524400-214535400 Strong transcription Breast Myoepithelial Primary Cells Breast
17 chr1:214524400-214574400 Weak transcription Brain Hippocampus Middle brain
18 chr1:214524800-214534800 Strong transcription Muscle Satellite Cultured Cells --
19 chr1:214524800-214535200 Strong transcription NH-A brain
20 chr1:214524800-214535400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:214524800-214537800 Strong transcription NHEK skin
22 chr1:214524800-214539200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:214525000-214534800 Strong transcription HSMM muscle
24 chr1:214525000-214535600 Strong transcription NHDF-Ad bronchial
25 chr1:214525000-214537000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:214525600-214540000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr1:214526000-214534000 Weak transcription Right Ventricle heart
28 chr1:214526000-214538600 Strong transcription Stomach Smooth Muscle stomach
29 chr1:214526000-214544600 Weak transcription Spleen Spleen
30 chr1:214526400-214537200 Strong transcription Fetal Muscle Trunk muscle
31 chr1:214526400-214542400 Strong transcription Fetal Adrenal Gland Adrenal Gland
32 chr1:214526600-214535000 Weak transcription Fetal Heart heart
33 chr1:214526800-214535400 Strong transcription Fetal Muscle Leg muscle
34 chr1:214527000-214535000 Strong transcription Osteobl bone
35 chr1:214527400-214540600 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr1:214527800-214542400 Weak transcription HepG2 liver
37 chr1:214528400-214535600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:214528600-214539800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:214528600-214552800 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:214528600-214555800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr1:214528800-214533000 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr1:214528800-214534600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr1:214528800-214537200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:214528800-214538800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:214528800-214539200 Strong transcription HUES6 Cell Line embryonic stem cell
46 chr1:214528800-214551800 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr1:214529000-214533200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr1:214529000-214533600 Strong transcription Skeletal Muscle Male skeletal muscle
49 chr1:214529000-214534000 Strong transcription Skeletal Muscle Female skeletal muscle
50 chr1:214529000-214534200 Strong transcription HSMMtube muscle

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Last update: Aug 31, 2015