The 2.0 version of rSNPBase

Variant report

Variant rs7413877
Chromosome Location chr1:214524509-214524510
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214486200-214526000 Weak transcription Psoas Muscle Psoas
2 chr1:214493000-214534600 Weak transcription Brain Inferior Temporal Lobe brain
3 chr1:214503200-214537800 Weak transcription Gastric stomach
4 chr1:214504600-214533200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:214507000-214529800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr1:214508400-214524600 Weak transcription Lung lung
7 chr1:214508400-214524800 Weak transcription Spleen Spleen
8 chr1:214508400-214529600 Weak transcription Pancreas Pancrea
9 chr1:214508400-214535000 Weak transcription Esophagus oesophagus
10 chr1:214508800-214528600 Weak transcription Fetal Intestine Large intestine
11 chr1:214511400-214524800 Weak transcription Right Ventricle heart
12 chr1:214511400-214529400 Weak transcription Aorta Aorta
13 chr1:214511400-214530400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr1:214511400-214531200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr1:214511600-214528000 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr1:214511800-214528000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr1:214512000-214537000 Weak transcription Rectal Smooth Muscle rectum
18 chr1:214512400-214524600 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr1:214513600-214552200 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr1:214514000-214537800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:214514800-214526400 Weak transcription Fetal Stomach stomach
22 chr1:214515400-214542600 Weak transcription Brain Substantia Nigra brain
23 chr1:214518000-214524600 Weak transcription Left Ventricle heart
24 chr1:214518400-214537800 Weak transcription Fetal Brain Male brain
25 chr1:214518600-214524800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:214518600-214524800 Weak transcription Stomach Smooth Muscle stomach
27 chr1:214518600-214529000 Weak transcription Ovary ovary
28 chr1:214518800-214524600 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr1:214518800-214528800 Weak transcription Fetal Kidney kidney
30 chr1:214519000-214528600 Weak transcription Fetal Lung lung
31 chr1:214519000-214533800 Weak transcription Duodenum Mucosa Duodenum
32 chr1:214519000-214557800 Weak transcription Dnd41 blood
33 chr1:214519200-214526400 Weak transcription Fetal Muscle Trunk muscle
34 chr1:214519200-214577200 Weak transcription Primary hematopoietic stem cells blood
35 chr1:214520400-214526800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr1:214520400-214526800 Weak transcription Fetal Muscle Leg muscle
37 chr1:214520400-214529400 Weak transcription Fetal Intestine Small intestine
38 chr1:214521200-214537600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:214521600-214531000 Weak transcription Hela-S3 cervix
40 chr1:214521800-214524800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr1:214521800-214524800 Weak transcription Adipose Nuclei Adipose
42 chr1:214521800-214525000 Weak transcription NHDF-Ad bronchial
43 chr1:214521800-214528800 Weak transcription Placenta Placenta
44 chr1:214522000-214526800 Weak transcription NHLF lung
45 chr1:214522200-214524800 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:214522800-214524800 Weak transcription HUVEC blood vessel
47 chr1:214522800-214526800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr1:214522800-214552800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr1:214523200-214524800 Weak transcription H1 Cell Line embryonic stem cell
50 chr1:214523200-214524800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015