Variant report

Variant	rs316709
Chromosome Location	chr5:41659967-41659968
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs11744826	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs11747941	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1423242	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1423243	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs167583	0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs16871741	0.85[ASN][1000 genomes]
rs16871793	0.85[ASN][1000 genomes]
rs16871799	0.85[ASN][1000 genomes]
rs16871938	0.85[ASN][1000 genomes]
rs170299	0.85[ASN][1000 genomes]
rs188818	0.85[ASN][1000 genomes]
rs2910628	0.85[ASN][1000 genomes]
rs316712	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs316713	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs316714	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs316715	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs316724	0.85[ASN][1000 genomes]
rs316730	0.85[ASN][1000 genomes]
rs316734	0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs316749	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs316751	0.85[ASN][1000 genomes]
rs316754	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs316756	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs316757	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs316758	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs4957170	0.85[ASN][1000 genomes]
rs4957404	0.85[ASN][1000 genomes]
rs4957407	0.85[ASN][1000 genomes]
rs4957418	0.85[ASN][1000 genomes]
rs583090	0.87[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs584067	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs590851	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs591384	0.87[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs602274	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs605064	0.96[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs607620	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs608902	0.85[ASN][1000 genomes]
rs609410	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs614952	0.85[ASN][1000 genomes]
rs621944	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs622413	0.85[ASN][1000 genomes]
rs624097	0.85[ASN][1000 genomes]
rs641270	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs654400	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs675812	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs678061	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs679399	0.85[ASN][1000 genomes]
rs6869822	0.85[ASN][1000 genomes]
rs72746919	0.85[ASN][1000 genomes]
rs7706652	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41658800-41663000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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