Variant report

Variant	rs316730
Chromosome Location	chr5:41650049-41650050
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 68 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:68)

rs_ID	r²[population]
rs10075064	0.95[CEU][hapmap];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10941557	0.95[CEU][hapmap];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11744826	1.00[ASN][1000 genomes]
rs11745373	0.83[EUR][1000 genomes]
rs11747941	1.00[ASN][1000 genomes]
rs13360001	0.95[CEU][hapmap];0.85[EUR][1000 genomes]
rs1423242	1.00[ASN][1000 genomes]
rs1423243	1.00[ASN][1000 genomes]
rs1533014	0.85[EUR][1000 genomes]
rs1582539	0.90[ASN][1000 genomes]
rs167583	1.00[ASN][1000 genomes]
rs16871741	1.00[ASN][1000 genomes]
rs16871793	1.00[ASN][1000 genomes]
rs16871799	1.00[ASN][1000 genomes]
rs16871938	1.00[ASN][1000 genomes]
rs170299	1.00[ASN][1000 genomes]
rs188818	1.00[ASN][1000 genomes]
rs2910628	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs316709	0.85[ASN][1000 genomes]
rs316712	1.00[ASN][1000 genomes]
rs316713	1.00[ASN][1000 genomes]
rs316714	1.00[ASN][1000 genomes]
rs316715	1.00[ASN][1000 genomes]
rs316721	0.90[EUR][1000 genomes]
rs316723	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs316724	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs316734	1.00[ASN][1000 genomes]
rs316744	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs316745	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs316749	1.00[ASN][1000 genomes]
rs316751	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs316754	1.00[ASN][1000 genomes]
rs316756	1.00[ASN][1000 genomes]
rs316757	1.00[ASN][1000 genomes]
rs316758	1.00[ASN][1000 genomes]
rs316760	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs35795768	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4050986	0.85[EUR][1000 genomes]
rs4957170	1.00[ASN][1000 genomes]
rs4957404	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4957407	1.00[ASN][1000 genomes]
rs4957418	1.00[ASN][1000 genomes]
rs4957424	0.86[EUR][1000 genomes]
rs583090	1.00[ASN][1000 genomes]
rs584067	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs590851	1.00[ASN][1000 genomes]
rs591384	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs602274	1.00[ASN][1000 genomes]
rs605064	1.00[ASN][1000 genomes]
rs607620	1.00[ASN][1000 genomes]
rs608902	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs609410	1.00[ASN][1000 genomes]
rs614952	1.00[ASN][1000 genomes]
rs621944	1.00[ASN][1000 genomes]
rs622413	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs624097	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs641270	1.00[ASN][1000 genomes]
rs6451581	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs654400	1.00[ASN][1000 genomes]
rs675146	0.82[CEU][hapmap]
rs675812	1.00[ASN][1000 genomes]
rs678061	1.00[ASN][1000 genomes]
rs679399	1.00[ASN][1000 genomes]
rs6869822	1.00[ASN][1000 genomes]
rs72746919	1.00[ASN][1000 genomes]
rs7706652	1.00[ASN][1000 genomes]
rs7729014	0.86[EUR][1000 genomes]
rs9292825	0.86[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41647600-41650600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr5:41647600-41650600	Enhancers	Muscle Satellite Cultured Cells	--
3	chr5:41648200-41650400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr5:41648200-41650600	Enhancers	Osteobl	bone
5	chr5:41648400-41650200	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr5:41648800-41650400	Enhancers	NH-A	brain
7	chr5:41649200-41650400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr5:41649400-41650400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr5:41649400-41650400	Enhancers	Ovary	ovary

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