The 2.0 version of rSNPBase

Variant report

Variant rs4957170
Chromosome Location chr5:41728775-41728776
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:41722000-41736800 Weak transcription HSMMtube muscle
2 chr5:41723000-41735800 Weak transcription GM12878-XiMat blood
3 chr5:41723000-41739200 Weak transcription Aorta Aorta
4 chr5:41725400-41739200 Weak transcription Right Ventricle heart
5 chr5:41725600-41747400 Weak transcription Fetal Kidney kidney
6 chr5:41726600-41736000 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr5:41726600-41736000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr5:41727000-41730600 Weak transcription Left Ventricle heart
9 chr5:41727200-41728800 Weak transcription Fetal Thymus thymus
10 chr5:41727200-41730600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr5:41727200-41735200 Weak transcription Stomach Smooth Muscle stomach
12 chr5:41727200-41735800 Weak transcription Lung lung
13 chr5:41727200-41738400 Weak transcription Thymus Thymus
14 chr5:41727400-41729000 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr5:41727400-41729000 Weak transcription Dnd41 blood
16 chr5:41727400-41730400 Weak transcription Primary T cells fromperipheralblood blood
17 chr5:41727400-41730400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr5:41727400-41735400 Weak transcription Hela-S3 cervix
19 chr5:41727400-41751400 Weak transcription Fetal Brain Female brain
20 chr5:41727600-41730400 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr5:41727600-41735400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr5:41727600-41735400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr5:41727600-41738400 Weak transcription Gastric stomach
24 chr5:41727600-41738400 Weak transcription Rectal Smooth Muscle rectum
25 chr5:41727800-41738400 Weak transcription Brain Inferior Temporal Lobe brain
26 chr5:41727800-41747200 Weak transcription NH-A brain
27 chr5:41727800-41758200 Weak transcription Esophagus oesophagus
28 chr5:41728000-41739200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr5:41728200-41738400 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr5:41728400-41729000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr5:41728400-41729200 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr5:41728400-41729200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr5:41728400-41729200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr5:41728400-41729200 Enhancers HMEC breast
35 chr5:41728400-41729200 Enhancers NHEK skin
36 chr5:41728400-41730600 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr5:41728400-41730600 Weak transcription Small Intestine intestine
38 chr5:41728400-41731600 Strong transcription Primary T cells from cord blood blood
39 chr5:41728600-41728800 ZNF genes & repeats Primary B cells from cord blood blood
40 chr5:41728600-41735200 Weak transcription Adipose Nuclei Adipose
41 chr5:41728600-41763800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015