Variant report
| Variant | rs2329815 |
|---|---|
| Chromosome Location | chr5:41815892-41815893 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:41778200-41838200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 2 | chr5:41795400-41816200 | Weak transcription | Colon Smooth Muscle | Colon |
| 3 | chr5:41795400-41835800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 4 | chr5:41796600-41825800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 5 | chr5:41796600-41830400 | Weak transcription | NH-A | brain |
| 6 | chr5:41796600-41830600 | Weak transcription | NHDF-Ad | bronchial |
| 7 | chr5:41796600-41830800 | Weak transcription | NHLF | lung |
| 8 | chr5:41800800-41838600 | Weak transcription | Fetal Stomach | stomach |
| 9 | chr5:41801000-41818000 | Weak transcription | Fetal Intestine Large | intestine |
| 10 | chr5:41801000-41835800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 11 | chr5:41801000-41849200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 12 | chr5:41801200-41816000 | Weak transcription | HSMMtube | muscle |
| 13 | chr5:41801200-41817800 | Weak transcription | Small Intestine | intestine |
| 14 | chr5:41801200-41849200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 15 | chr5:41801200-41849200 | Weak transcription | Fetal Brain Male | brain |
| 16 | chr5:41804800-41831400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 17 | chr5:41806800-41816600 | Weak transcription | Aorta | Aorta |
| 18 | chr5:41807400-41818000 | Weak transcription | Primary B cells from cord blood | blood |
| 19 | chr5:41807400-41822200 | Weak transcription | Left Ventricle | heart |
| 20 | chr5:41807400-41826800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 21 | chr5:41807400-41827400 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 22 | chr5:41807400-41831200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 23 | chr5:41807400-41831600 | Weak transcription | Thymus | Thymus |
| 24 | chr5:41807400-41832000 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 25 | chr5:41807600-41822600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 26 | chr5:41807600-41827200 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 27 | chr5:41807600-41832000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 28 | chr5:41808000-41830400 | Weak transcription | Primary B cells from peripheral blood | blood |
| 29 | chr5:41808000-41830400 | Weak transcription | HMEC | breast |
| 30 | chr5:41808600-41816200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 31 | chr5:41808800-41825200 | Weak transcription | Primary T cells from cord blood | blood |
| 32 | chr5:41808800-41826800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 33 | chr5:41808800-41829000 | Weak transcription | Hela-S3 | cervix |
| 34 | chr5:41808800-41831000 | Weak transcription | Fetal Thymus | thymus |
| 35 | chr5:41808800-41831400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 36 | chr5:41809000-41820800 | Weak transcription | Dnd41 | blood |
| 37 | chr5:41809000-41823400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 38 | chr5:41809000-41825000 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 39 | chr5:41809000-41830600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 40 | chr5:41809000-41832000 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 41 | chr5:41809800-41836200 | Weak transcription | Right Ventricle | heart |
| 42 | chr5:41810000-41817000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 43 | chr5:41810000-41825000 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 44 | chr5:41810000-41826800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 45 | chr5:41810600-41830600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 46 | chr5:41812000-41818200 | Weak transcription | HUVEC | blood vessel |
| 47 | chr5:41813800-41825400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 48 | chr5:41814000-41842200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 49 | chr5:41814200-41816000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 50 | chr5:41815200-41816000 | Enhancers | Muscle Satellite Cultured Cells | -- |
