Variant report
| Variant | rs2231917 |
|---|---|
| Chromosome Location | chr5:41925435-41925436 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:41923800-41925800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr5:41924400-41926800 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 3 | chr5:41924600-41926200 | Flanking Active TSS | Cortex derived primary cultured neurospheres | brain |
| 4 | chr5:41924600-41926200 | Active TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 5 | chr5:41924600-41926200 | Active TSS | Brain Angular Gyrus | brain |
| 6 | chr5:41924600-41926400 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
| 7 | chr5:41924600-41926400 | Active TSS | Rectal Mucosa Donor 29 | rectum |
| 8 | chr5:41924800-41925800 | Active TSS | H1 Cell Line | embryonic stem cell |
| 9 | chr5:41924800-41925800 | Active TSS | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 10 | chr5:41924800-41925800 | Active TSS | Brain Germinal Matrix | brain |
| 11 | chr5:41924800-41925800 | Active TSS | Colonic Mucosa | Colon |
| 12 | chr5:41924800-41925800 | Active TSS | Fetal Brain Female | brain |
| 13 | chr5:41924800-41926000 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
| 14 | chr5:41924800-41926000 | Active TSS | H9 Cell Line | embryonic stem cell |
| 15 | chr5:41924800-41926000 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 16 | chr5:41924800-41926000 | Active TSS | HUES48 Cell Line | embryonic stem cell |
| 17 | chr5:41924800-41926000 | Active TSS | HUES64 Cell Line | embryonic stem cell |
| 18 | chr5:41924800-41926000 | Active TSS | Aorta | Aorta |
| 19 | chr5:41924800-41926000 | Active TSS | Ovary | ovary |
| 20 | chr5:41924800-41926000 | Active TSS | Placenta Amnion | Placenta Amnion |
| 21 | chr5:41924800-41926000 | Active TSS | Right Ventricle | heart |
| 22 | chr5:41924800-41926200 | Active TSS | HUES6 Cell Line | embryonic stem cell |
| 23 | chr5:41924800-41926200 | Active TSS | iPS-15b Cell Line | embryonic stem cell |
| 24 | chr5:41924800-41926200 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 25 | chr5:41924800-41926200 | Flanking Active TSS | Primary mononuclear cells fromperipheralblood | Blood |
| 26 | chr5:41924800-41926200 | Active TSS | Brain Inferior Temporal Lobe | brain |
| 27 | chr5:41924800-41926200 | Active TSS | Fetal Kidney | kidney |
| 28 | chr5:41924800-41926200 | Active TSS | Left Ventricle | heart |
| 29 | chr5:41924800-41926200 | Active TSS | Lung | lung |
| 30 | chr5:41924800-41926200 | Active TSS | Pancreas | Pancrea |
| 31 | chr5:41924800-41926200 | Active TSS | Psoas Muscle | Psoas |
| 32 | chr5:41924800-41926200 | Active TSS | Sigmoid Colon | Sigmoid Colon |
| 33 | chr5:41924800-41926200 | Active TSS | Stomach Smooth Muscle | stomach |
| 34 | chr5:41924800-41926200 | Flanking Active TSS | HMEC | breast |
| 35 | chr5:41924800-41926200 | Active TSS | HSMMtube | muscle |
| 36 | chr5:41924800-41926400 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 37 | chr5:41924800-41926400 | Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 38 | chr5:41924800-41926400 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 39 | chr5:41925000-41925600 | Active TSS | ES-UCSF4 Cell Line | embryonic stem cell |
| 40 | chr5:41925000-41925600 | Active TSS | Fetal Brain Male | brain |
| 41 | chr5:41925000-41925600 | Transcr. at gene 5' and 3' | Right Atrium | heart |
| 42 | chr5:41925000-41925800 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 43 | chr5:41925000-41925800 | Active TSS | Primary T helper memory cells from peripheral blood 1 | blood |
| 44 | chr5:41925000-41925800 | Active TSS | Primary T killer memory cells from peripheral blood | blood |
| 45 | chr5:41925000-41925800 | Active TSS | Fetal Heart | heart |
| 46 | chr5:41925000-41926000 | Flanking Active TSS | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 47 | chr5:41925000-41926000 | Active TSS | iPS-18 Cell Line | embryonic stem cell |
| 48 | chr5:41925000-41926000 | Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
| 49 | chr5:41925000-41926000 | Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
| 50 | chr5:41925000-41926000 | Active TSS | Gastric | stomach |
