Variant report

Variant	rs2231910
Chromosome Location	chr5:41924949-41924950
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:219)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:219 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr5:41923310-41926130	Hela-S3	cervix:	n/a	n/a
2	POLR2A	chr5:41924878-41926192	HUVEC	blood vessel:	n/a	n/a
3	POLR2A	chr5:41924861-41926066	GM19099	blood:	n/a	n/a
4	RELA	chr5:41924704-41926156	GM18951	blood:	n/a	n/a
5	ELF1	chr5:41924923-41925607	K562	blood:	n/a	n/a
6	MBD4	chr5:41924937-41925600	HepG2	liver:	n/a	n/a
7	POLR2A	chr5:41924668-41925714	PFSK-1	brain:	n/a	n/a
8	MAX	chr5:41924807-41926189	HepG2	liver:	n/a	n/a
9	TAF1	chr5:41924859-41925842	GM12878	blood:	n/a	n/a
10	BCL3	chr5:41924887-41925746	GM12878	blood:	n/a	chr5:41925618-41925627
11	ELF1	chr5:41924874-41925803	GM12878	blood:	n/a	n/a
12	POLR2A	chr5:41924839-41926085	GM12878	blood:	n/a	n/a
13	POU2F2	chr5:41924917-41925652	GM12891	blood:	n/a	n/a
14	POLR2A	chr5:41924940-41926028	GM12878	blood:	n/a	n/a
15	POLR2A	chr5:41924657-41925789	PFSK-1	brain:	n/a	n/a
16	SIN3AK20	chr5:41924833-41925806	MCF-7	breast:	n/a	n/a
17	POLR2A	chr5:41924510-41926082	Raji	blood:	n/a	n/a
18	MAX	chr5:41924938-41926233	K562	blood:	n/a	n/a
19	POLR2A	chr5:41924808-41926095	GM12891	blood:	n/a	n/a
20	RCOR1	chr5:41924384-41926714	K562	blood:	n/a	n/a
21	MAX	chr5:41924911-41926285	ECC-1	luminal epithelium:	n/a	n/a
22	HCFC1	chr5:41924746-41926117	K562	blood:	n/a	n/a
23	GTF2B	chr5:41924817-41926067	K562	blood:	n/a	n/a
24	POLR2A	chr5:41924855-41926043	GM18505	blood:	n/a	n/a
25	KAP1	chr5:41924876-41925579	U2OS	brain:	n/a	n/a
26	NFIC	chr5:41924608-41925795	GM12878	blood:	n/a	n/a
27	NRF1	chr5:41924649-41925735	SK-N-SH	brain:	n/a	n/a
28	RFX5	chr5:41924669-41926167	Hela-S3	cervix:	n/a	n/a
29	CBX3	chr5:41924898-41925492	K562	blood:	n/a	chr5:41925192-41925203
30	NR2F2	chr5:41924882-41925493	K562	blood:	n/a	n/a
31	WRNIP1	chr5:41924856-41925572	GM12878	blood:	n/a	n/a
32	MAX	chr5:41924887-41926115	A549	lung:	n/a	n/a
33	MYC	chr5:41924809-41926703	K562	blood:	n/a	n/a
34	TEAD4	chr5:41924785-41925576	K562	blood:	n/a	n/a
35	POU2F2	chr5:41924875-41925632	GM12878	blood:	n/a	n/a
36	TCF7L2	chr5:41924913-41926397	Hela-S3	cervix:	n/a	n/a
37	STAT5A	chr5:41924817-41925608	K562	blood:	n/a	chr5:41925110-41925117 chr5:41925106-41925114
38	EP300	chr5:41924395-41926348	K562	blood:	n/a	chr5:41924748-41924762 chr5:41926164-41926171
39	CREB1	chr5:41924717-41926063	K562	blood:	n/a	n/a
40	POLR2A	chr5:41924714-41926779	K562	blood:	n/a	n/a
41	POLR2A	chr5:41924764-41925840	SK-N-MC	brain:	n/a	n/a
42	POLR2A	chr5:41924933-41925840	MCF-7	breast:	n/a	n/a
43	POLR2A	chr5:41924906-41926127	K562	blood:	n/a	n/a
44	CHD2	chr5:41924872-41926019	GM12878	blood:	n/a	n/a
45	TBL1XR1	chr5:41924862-41926385	K562	blood:	n/a	n/a
46	BCLAF1	chr5:41924812-41925670	GM12878	blood:	n/a	chr5:41925618-41925627
47	EP300	chr5:41924854-41926349	GM12878	blood:	n/a	chr5:41926164-41926171
48	SMC3	chr5:41924839-41925981	Hela-S3	cervix:	n/a	chr5:41925282-41925292 chr5:41925328-41925342
49	POLR2A	chr5:41924764-41926194	GM12878	blood:	n/a	n/a
50	POLR2A	chr5:41917385-41928379	K562	blood:	n/a	n/a

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:41866693..41874585-chr5:41920680..41930326,14	K562	blood:
2	chr5:41924314..41927397-chr5:41938777..41942007,3	MCF-7	breast:
3	chr5:41924225..41926765-chr5:41937223..41939726,2	MCF-7	breast:
4	chr1:149859141..149859798-chr5:41924805..41925764,2	Hela-S3	cervix:
5	chr5:41864208..41872390-chr5:41920936..41926995,11	K562	blood:
6	chr5:41904182..41904989-chr5:41924735..41925458,3	Hela-S3	cervix:
7	chr5:41924840..41925398-chr5:43483933..43484621,2	Hela-S3	cervix:
8	chr5:41924171..41926713-chr5:43064683..43066902,2	K562	blood:
9	chr2:38977992..38978771-chr5:41924887..41925635,2	Hela-S3	cervix:
10	chr5:41903013..41905286-chr5:41924628..41927661,3	MCF-7	breast:

No data

Variant related genes	Relation type
FBXO4	TF binding region
ENSG00000178096	Chromatin interaction
ENSG00000248668	Chromatin interaction
ENSG00000249492	Chromatin interaction
ENSG00000152147	Chromatin interaction
ENSG00000172262	Chromatin interaction
ENSG00000151876	Chromatin interaction
ENSG00000205765	Chromatin interaction
ENSG00000115875	Chromatin interaction
ENSG00000184270	Chromatin interaction
ENSG00000083720	Chromatin interaction
ENSG00000151881	Chromatin interaction

Extended variants
information (count: 183 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:178)

rs_ID	r²[population]
rs10035434	1.00[EUR][1000 genomes]
rs10040757	1.00[EUR][1000 genomes]
rs10043326	1.00[EUR][1000 genomes]
rs10043371	1.00[EUR][1000 genomes]
rs10045473	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.85[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10051322	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10052226	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs10053522	1.00[EUR][1000 genomes]
rs10054130	1.00[EUR][1000 genomes]
rs10057546	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10057587	1.00[EUR][1000 genomes]
rs10057645	1.00[EUR][1000 genomes]
rs10059424	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10060170	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.85[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10062703	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10064298	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10064380	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10065016	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10065335	1.00[EUR][1000 genomes]
rs10069638	1.00[CEU][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1006996	1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10070201	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10075064	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs10075429	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10076689	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10077481	0.93[ASW][hapmap];1.00[CEU][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.81[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10078011	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs10079651	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs1027348	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes]
rs10472357	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.85[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10472359	0.87[EUR][1000 genomes]
rs10473252	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10473255	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10941557	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs1118104	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11738956	0.95[EUR][1000 genomes]
rs11739257	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs11740524	0.93[ASN][1000 genomes]
rs11741731	1.00[CEU][hapmap]
rs11744279	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs11744516	0.81[ASN][1000 genomes]
rs11744623	0.93[ASN][1000 genomes]
rs11745373	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs11745460	1.00[EUR][1000 genomes]
rs11745530	1.00[EUR][1000 genomes]
rs11746530	1.00[EUR][1000 genomes]
rs11747648	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11747921	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs11748575	1.00[CEU][hapmap]
rs11748578	1.00[CEU][hapmap]
rs11748933	1.00[EUR][1000 genomes]
rs1175227	1.00[ASN][1000 genomes]
rs13353950	1.00[CEU][hapmap]
rs13355194	1.00[EUR][1000 genomes]
rs13357951	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13357980	1.00[CEU][hapmap]
rs13358459	1.00[EUR][1000 genomes]
rs13360001	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs13436920	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap]
rs1355089	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs1508816	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1533014	0.93[ASN][1000 genomes]
rs1567323	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs16871972	0.93[ASN][1000 genomes]
rs16872052	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs17339188	1.00[EUR][1000 genomes]
rs17739462	0.93[ASN][1000 genomes]
rs17847285	0.93[ASN][1000 genomes]
rs1876654	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2113053	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2231917	1.00[ASN][1000 genomes]
rs2329815	0.93[ASN][1000 genomes]
rs277406	1.00[ASN][1000 genomes]
rs277407	1.00[ASN][1000 genomes]
rs277414	1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs277416	1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs28647448	1.00[EUR][1000 genomes]
rs316746	0.87[EUR][1000 genomes]
rs34339137	0.93[ASN][1000 genomes]
rs34493032	1.00[EUR][1000 genomes]
rs34663371	0.93[ASN][1000 genomes]
rs35077044	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs35154057	0.93[ASN][1000 genomes]
rs35252930	0.81[ASN][1000 genomes]
rs35613904	0.93[ASN][1000 genomes]
rs35890705	1.00[EUR][1000 genomes]
rs3863160	0.81[AMR][1000 genomes]
rs4050986	0.93[ASN][1000 genomes]
rs4289604	1.00[ASN][1000 genomes]
rs4324728	1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs4957171	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4957173	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4957174	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4957175	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4957176	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4957177	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4957178	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4957180	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4957182	0.90[AMR][1000 genomes]
rs4957422	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs4957423	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs4957424	0.93[ASN][1000 genomes]
rs4957428	0.93[ASN][1000 genomes]
rs4957429	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs4957430	0.93[ASN][1000 genomes]
rs4957431	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4957432	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4957433	1.00[ASN][1000 genomes]
rs4957434	1.00[CEU][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap]
rs4957435	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4957436	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4957437	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4957438	1.00[CEU][hapmap];1.00[JPT][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4957439	1.00[ASN][1000 genomes]
rs57944767	0.90[EUR][1000 genomes]
rs582920	0.92[EUR][1000 genomes]
rs583090	0.87[EUR][1000 genomes]
rs584067	0.90[EUR][1000 genomes]
rs590851	0.90[EUR][1000 genomes]
rs591384	0.85[EUR][1000 genomes]
rs602274	0.90[EUR][1000 genomes]
rs607620	0.87[EUR][1000 genomes]
rs61058110	0.95[EUR][1000 genomes]
rs621944	0.87[EUR][1000 genomes]
rs626907	1.00[JPT][hapmap]
rs627476	0.87[EUR][1000 genomes]
rs641270	0.87[EUR][1000 genomes]
rs6451582	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs654400	0.87[EUR][1000 genomes]
rs66820325	0.93[ASN][1000 genomes]
rs67114999	0.93[ASN][1000 genomes]
rs67152480	0.95[EUR][1000 genomes]
rs676067	1.00[ASN][1000 genomes]
rs678061	0.92[EUR][1000 genomes]
rs6881873	0.93[ASN][1000 genomes]
rs6889217	1.00[JPT][hapmap]
rs72746926	0.95[EUR][1000 genomes]
rs72746928	0.95[EUR][1000 genomes]
rs72746930	0.95[EUR][1000 genomes]
rs72746932	0.95[EUR][1000 genomes]
rs72746933	0.93[EUR][1000 genomes]
rs72746952	0.95[EUR][1000 genomes]
rs72746962	0.90[EUR][1000 genomes]
rs72746966	0.95[EUR][1000 genomes]
rs72746968	0.95[EUR][1000 genomes]
rs72746975	0.95[EUR][1000 genomes]
rs72746983	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72746985	1.00[EUR][1000 genomes]
rs72746995	1.00[EUR][1000 genomes]
rs72746996	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72746997	0.95[EUR][1000 genomes]
rs72746999	1.00[EUR][1000 genomes]
rs72747000	1.00[EUR][1000 genomes]
rs72747001	1.00[EUR][1000 genomes]
rs72747002	1.00[EUR][1000 genomes]
rs72748607	1.00[EUR][1000 genomes]
rs72748608	1.00[EUR][1000 genomes]
rs72748609	1.00[EUR][1000 genomes]
rs72748611	1.00[EUR][1000 genomes]
rs72748613	1.00[EUR][1000 genomes]
rs72748614	1.00[EUR][1000 genomes]
rs72748616	1.00[EUR][1000 genomes]
rs72748619	1.00[EUR][1000 genomes]
rs72748620	1.00[EUR][1000 genomes]
rs72748623	0.83[EUR][1000 genomes]
rs7341062	1.00[EUR][1000 genomes]
rs7712106	1.00[EUR][1000 genomes]
rs7712911	1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs7723992	1.00[EUR][1000 genomes]
rs7728482	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7729014	0.93[ASN][1000 genomes]
rs7733096	0.93[ASN][1000 genomes]
rs9292825	0.86[ASN][1000 genomes]
rs9292826	0.95[EUR][1000 genomes]
rs9292828	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes]
rs9292832	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9885033	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9885117	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762518	chr5:41780210-41935113	Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	108 gene(s)	inside rSNPs	diseases
2	nsv830272	chr5:41833365-41986167	Strong transcription Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	111 gene(s)	inside rSNPs	diseases
3	nsv830273	chr5:41867296-42066070	Flanking Active TSS Active TSS Genic enhancers Weak transcription Bivalent Enhancer Enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	111 gene(s)	inside rSNPs	diseases
4	nsv933208	chr5:41879946-42876624	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	112 gene(s)	inside rSNPs	diseases
5	nsv492147	chr5:41902086-42896162	Enhancers Flanking Active TSS Active TSS Genic enhancers Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	113 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41905200-41925000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr5:41905800-41925000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr5:41905800-41925000	Weak transcription	Gastric	stomach
4	chr5:41913200-41925000	Weak transcription	Esophagus	oesophagus
5	chr5:41913400-41925000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr5:41915200-41925000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr5:41916000-41925000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr5:41920400-41925400	Weak transcription	Spleen	Spleen
9	chr5:41920800-41925000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr5:41923800-41925200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr5:41923800-41925800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr5:41924400-41925200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
13	chr5:41924400-41925200	Flanking Active TSS	Dnd41	blood
14	chr5:41924400-41925200	Flanking Active TSS	K562	blood
15	chr5:41924400-41925200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
16	chr5:41924400-41925400	Flanking Active TSS	GM12878-XiMat	blood
17	chr5:41924400-41926800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr5:41924600-41925000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr5:41924600-41925000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
20	chr5:41924600-41925000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr5:41924600-41925000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
22	chr5:41924600-41925000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr5:41924600-41925000	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
24	chr5:41924600-41925000	Flanking Active TSS	Fetal Heart	heart
25	chr5:41924600-41925000	Flanking Active TSS	HepG2	liver
26	chr5:41924600-41925000	Flanking Active TSS	NHDF-Ad	bronchial
27	chr5:41924600-41925200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr5:41924600-41925200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr5:41924600-41925200	Flanking Active TSS	Primary T cells from cord blood	blood
30	chr5:41924600-41925200	Flanking Active TSS	Primary hematopoietic stem cells	blood
31	chr5:41924600-41925200	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
32	chr5:41924600-41925200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr5:41924600-41925200	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
34	chr5:41924600-41925200	Flanking Active TSS	Adipose Nuclei	Adipose
35	chr5:41924600-41925200	Flanking Active TSS	Brain Cingulate Gyrus	brain
36	chr5:41924600-41925200	Flanking Active TSS	Colon Smooth Muscle	Colon
37	chr5:41924600-41925200	Flanking Active TSS	Fetal Lung	lung
38	chr5:41924600-41925200	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
39	chr5:41924600-41925200	Flanking Active TSS	Osteobl	bone
40	chr5:41924600-41926200	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
41	chr5:41924600-41926200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr5:41924600-41926200	Active TSS	Brain Angular Gyrus	brain
43	chr5:41924600-41926400	Active TSS	ES-I3 Cell Line	embryonic stem cell
44	chr5:41924600-41926400	Active TSS	Rectal Mucosa Donor 29	rectum
45	chr5:41924800-41925000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
46	chr5:41924800-41925000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
47	chr5:41924800-41925000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
48	chr5:41924800-41925000	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
49	chr5:41924800-41925000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr5:41924800-41925000	Flanking Active TSS	Brain Anterior Caudate	brain

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