The 2.0 version of rSNPBase

Variant report

Variant rs72746968
Chromosome Location chr5:41843015-41843016
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:41801000-41849200 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr5:41801200-41849200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr5:41801200-41849200 Weak transcription Fetal Brain Male brain
4 chr5:41818400-41852000 Weak transcription Small Intestine intestine
5 chr5:41819200-41852800 Weak transcription Pancreas Pancrea
6 chr5:41822600-41849200 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr5:41824600-41859400 Weak transcription Spleen Spleen
8 chr5:41825800-41849200 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr5:41827800-41849800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr5:41828600-41849200 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr5:41828800-41849000 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr5:41829400-41851000 Weak transcription Fetal Intestine Small intestine
13 chr5:41830000-41843400 Strong transcription Primary T helper cells fromperipheralblood blood
14 chr5:41830800-41849200 Weak transcription H1 Cell Line embryonic stem cell
15 chr5:41830800-41849800 Weak transcription Gastric stomach
16 chr5:41831200-41849200 Weak transcription Brain Germinal Matrix brain
17 chr5:41831200-41854400 Weak transcription Colonic Mucosa Colon
18 chr5:41831400-41849200 Weak transcription Placenta Placenta
19 chr5:41832200-41849200 Weak transcription Fetal Kidney kidney
20 chr5:41832800-41849200 Weak transcription Primary monocytes fromperipheralblood blood
21 chr5:41832800-41850000 Weak transcription Esophagus oesophagus
22 chr5:41832800-41869200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr5:41833400-41849200 Weak transcription Fetal Muscle Trunk muscle
24 chr5:41834000-41849200 Weak transcription Duodenum Mucosa Duodenum
25 chr5:41834600-41849200 Weak transcription Primary hematopoietic stem cells blood
26 chr5:41835800-41843200 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr5:41835800-41845600 Strong transcription Dnd41 blood
28 chr5:41836000-41857200 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr5:41836200-41849200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr5:41836400-41843600 Weak transcription Brain Cingulate Gyrus brain
31 chr5:41836400-41849200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr5:41836400-41849200 Weak transcription Brain Anterior Caudate brain
33 chr5:41836400-41849200 Weak transcription Brain Inferior Temporal Lobe brain
34 chr5:41836400-41849200 Weak transcription Brain Substantia Nigra brain
35 chr5:41836400-41849200 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr5:41836400-41849200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr5:41836400-41849400 Weak transcription Colon Smooth Muscle Colon
38 chr5:41836600-41843400 Strong transcription Hela-S3 cervix
39 chr5:41836600-41849000 Weak transcription NHDF-Ad bronchial
40 chr5:41836600-41849200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr5:41836600-41849200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr5:41836600-41849200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr5:41836600-41849200 Weak transcription Ovary ovary
44 chr5:41836600-41849200 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr5:41836600-41849200 Weak transcription Stomach Smooth Muscle stomach
46 chr5:41836600-41849200 Weak transcription Osteobl bone
47 chr5:41836600-41849400 Weak transcription HSMM muscle
48 chr5:41836600-41863800 Weak transcription Muscle Satellite Cultured Cells --
49 chr5:41837000-41849200 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr5:41837000-41849200 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015