Variant report

Variant	rs222224
Chromosome Location	chr5:41635538-41635539
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 92 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:92)

rs_ID	r²[population]
rs10078011	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs1027348	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes]
rs11738956	0.92[EUR][1000 genomes]
rs11744826	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11747941	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12109887	1.00[EUR][1000 genomes]
rs1423242	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1423243	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs167583	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs170299	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1833818	1.00[ASN][1000 genomes]
rs188818	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2453241	1.00[EUR][1000 genomes]
rs2656967	0.92[EUR][1000 genomes]
rs316710	0.95[EUR][1000 genomes]
rs316711	1.00[EUR][1000 genomes]
rs316712	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs316713	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs316714	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs316715	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs316723	0.95[ASN][1000 genomes]
rs316729	1.00[EUR][1000 genomes]
rs316731	1.00[EUR][1000 genomes]
rs316732	1.00[EUR][1000 genomes]
rs316733	1.00[EUR][1000 genomes]
rs316734	1.00[EUR][1000 genomes]
rs316743	1.00[EUR][1000 genomes]
rs316744	1.00[ASN][1000 genomes]
rs316745	1.00[ASN][1000 genomes]
rs316746	1.00[EUR][1000 genomes]
rs316747	1.00[EUR][1000 genomes]
rs316748	1.00[EUR][1000 genomes]
rs316749	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs316750	1.00[EUR][1000 genomes]
rs316752	1.00[EUR][1000 genomes]
rs316754	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs316756	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs316757	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs316758	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35795768	0.92[ASN][1000 genomes]
rs4957160	1.00[ASN][1000 genomes]
rs4957161	1.00[ASN][1000 genomes]
rs4957403	0.95[ASN][1000 genomes]
rs57944767	0.87[EUR][1000 genomes]
rs582920	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs583090	0.90[EUR][1000 genomes]
rs584067	1.00[CEU][hapmap];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs590424	0.92[EUR][1000 genomes]
rs590851	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs591384	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs602274	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs605064	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs607620	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs609410	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61058110	0.92[EUR][1000 genomes]
rs614952	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs614990	0.92[EUR][1000 genomes]
rs620185	0.92[EUR][1000 genomes]
rs620501	0.92[EUR][1000 genomes]
rs621944	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs627476	1.00[EUR][1000 genomes]
rs636461	0.92[EUR][1000 genomes]
rs636905	0.85[EUR][1000 genomes]
rs641270	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs654400	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs660692	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs67041756	0.97[EUR][1000 genomes]
rs67152480	0.92[EUR][1000 genomes]
rs675785	1.00[EUR][1000 genomes]
rs675812	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs676512	1.00[CEU][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes]
rs678061	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs679399	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs679548	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs694212	0.92[EUR][1000 genomes]
rs72746926	0.92[EUR][1000 genomes]
rs72746928	0.92[EUR][1000 genomes]
rs72746930	0.92[EUR][1000 genomes]
rs72746932	0.92[EUR][1000 genomes]
rs72746933	0.90[EUR][1000 genomes]
rs72746952	0.92[EUR][1000 genomes]
rs72746962	0.87[EUR][1000 genomes]
rs72746966	0.92[EUR][1000 genomes]
rs72746968	0.92[EUR][1000 genomes]
rs72746975	0.92[EUR][1000 genomes]
rs72758378	0.92[EUR][1000 genomes]
rs72760304	0.92[EUR][1000 genomes]
rs72761834	1.00[EUR][1000 genomes]
rs7706652	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7723992	0.87[EUR][1000 genomes]
rs9292826	0.92[EUR][1000 genomes]
rs9292828	0.92[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41630000-41636800	Weak transcription	Ovary	ovary
2	chr5:41635400-41635600	Enhancers	HUES48 Cell Line	embryonic stem cell

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