Variant report
| Variant | rs9292828 |
|---|---|
| Chromosome Location | chr5:41838232-41838233 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:41800800-41838600 | Weak transcription | Fetal Stomach | stomach |
| 2 | chr5:41801000-41849200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 3 | chr5:41801200-41849200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 4 | chr5:41801200-41849200 | Weak transcription | Fetal Brain Male | brain |
| 5 | chr5:41814000-41842200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 6 | chr5:41816200-41838600 | Weak transcription | NHEK | skin |
| 7 | chr5:41818400-41852000 | Weak transcription | Small Intestine | intestine |
| 8 | chr5:41819200-41852800 | Weak transcription | Pancreas | Pancrea |
| 9 | chr5:41822600-41849200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 10 | chr5:41824600-41859400 | Weak transcription | Spleen | Spleen |
| 11 | chr5:41825800-41849200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 12 | chr5:41827800-41849800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 13 | chr5:41828600-41849200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 14 | chr5:41828800-41849000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 15 | chr5:41829000-41838800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 16 | chr5:41829400-41851000 | Weak transcription | Fetal Intestine Small | intestine |
| 17 | chr5:41830000-41843400 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 18 | chr5:41830800-41849200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 19 | chr5:41830800-41849800 | Weak transcription | Gastric | stomach |
| 20 | chr5:41831200-41849200 | Weak transcription | Brain Germinal Matrix | brain |
| 21 | chr5:41831200-41854400 | Weak transcription | Colonic Mucosa | Colon |
| 22 | chr5:41831400-41849200 | Weak transcription | Placenta | Placenta |
| 23 | chr5:41831800-41838400 | Weak transcription | GM12878-XiMat | blood |
| 24 | chr5:41832200-41849200 | Weak transcription | Fetal Kidney | kidney |
| 25 | chr5:41832400-41842400 | Weak transcription | Fetal Lung | lung |
| 26 | chr5:41832400-41842600 | Weak transcription | K562 | blood |
| 27 | chr5:41832600-41838800 | Weak transcription | Lung | lung |
| 28 | chr5:41832800-41838800 | Weak transcription | Thymus | Thymus |
| 29 | chr5:41832800-41849200 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 30 | chr5:41832800-41850000 | Weak transcription | Esophagus | oesophagus |
| 31 | chr5:41832800-41869200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 32 | chr5:41833400-41838400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 33 | chr5:41833400-41849200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 34 | chr5:41833600-41838800 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 35 | chr5:41833800-41839000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 36 | chr5:41834000-41849200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 37 | chr5:41834200-41839600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 38 | chr5:41834600-41849200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 39 | chr5:41835800-41843200 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 40 | chr5:41835800-41845600 | Strong transcription | Dnd41 | blood |
| 41 | chr5:41836000-41838400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 42 | chr5:41836000-41857200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 43 | chr5:41836200-41838400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 44 | chr5:41836200-41838400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 45 | chr5:41836200-41839800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 46 | chr5:41836200-41839800 | Weak transcription | HMEC | breast |
| 47 | chr5:41836200-41849200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 48 | chr5:41836400-41838400 | Weak transcription | NH-A | brain |
| 49 | chr5:41836400-41838600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 50 | chr5:41836400-41838600 | Weak transcription | Brain Hippocampus Middle | brain |
