Variant report
| Variant | rs1027348 |
|---|---|
| Chromosome Location | chr5:41786266-41786267 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:41731400-41800400 | Weak transcription | Small Intestine | intestine |
| 2 | chr5:41735800-41800400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 3 | chr5:41739400-41788800 | Weak transcription | Gastric | stomach |
| 4 | chr5:41739400-41790200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 5 | chr5:41739400-41799600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 6 | chr5:41739600-41786400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 7 | chr5:41739600-41794800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 8 | chr5:41749200-41797800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 9 | chr5:41752000-41789400 | Weak transcription | Brain Hippocampus Middle | brain |
| 10 | chr5:41756200-41813800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 11 | chr5:41759800-41800400 | Weak transcription | Esophagus | oesophagus |
| 12 | chr5:41760600-41789400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 13 | chr5:41761200-41798400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 14 | chr5:41761600-41804600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 15 | chr5:41761800-41795000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 16 | chr5:41762000-41799600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 17 | chr5:41762200-41794200 | Weak transcription | Adipose Nuclei | Adipose |
| 18 | chr5:41762400-41794400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 19 | chr5:41763200-41788600 | Weak transcription | NHLF | lung |
| 20 | chr5:41763800-41788600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 21 | chr5:41763800-41793200 | Weak transcription | NHEK | skin |
| 22 | chr5:41764000-41794600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 23 | chr5:41764600-41788600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 24 | chr5:41765000-41793000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 25 | chr5:41765000-41793200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 26 | chr5:41765400-41788400 | Weak transcription | HSMM | muscle |
| 27 | chr5:41765600-41786400 | Weak transcription | HSMMtube | muscle |
| 28 | chr5:41768800-41791000 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 29 | chr5:41770000-41794600 | Weak transcription | Thymus | Thymus |
| 30 | chr5:41773200-41792200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 31 | chr5:41776000-41792600 | Weak transcription | GM12878-XiMat | blood |
| 32 | chr5:41776000-41798200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 33 | chr5:41776400-41787400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 34 | chr5:41776400-41793400 | Weak transcription | Brain Angular Gyrus | brain |
| 35 | chr5:41776800-41786400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 36 | chr5:41777000-41786600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 37 | chr5:41778200-41838200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 38 | chr5:41778600-41787800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 39 | chr5:41779000-41795200 | Weak transcription | Lung | lung |
| 40 | chr5:41780000-41800200 | Weak transcription | Fetal Intestine Large | intestine |
| 41 | chr5:41781200-41786600 | Strong transcription | Primary T cells from cord blood | blood |
| 42 | chr5:41782200-41787400 | Weak transcription | Colon Smooth Muscle | Colon |
| 43 | chr5:41782400-41787800 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 44 | chr5:41782800-41788000 | Strong transcription | Dnd41 | blood |
| 45 | chr5:41782800-41792200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 46 | chr5:41783400-41786800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 47 | chr5:41783600-41790200 | Weak transcription | Psoas Muscle | Psoas |
| 48 | chr5:41783800-41787400 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 49 | chr5:41783800-41790400 | Weak transcription | Fetal Thymus | thymus |
| 50 | chr5:41784000-41795000 | Weak transcription | Right Ventricle | heart |
