The 2.0 version of rSNPBase

Variant report

Variant rs72746962
Chromosome Location chr5:41829112-41829113
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:41778200-41838200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr5:41795400-41835800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr5:41796600-41830400 Weak transcription NH-A brain
4 chr5:41796600-41830600 Weak transcription NHDF-Ad bronchial
5 chr5:41796600-41830800 Weak transcription NHLF lung
6 chr5:41800800-41838600 Weak transcription Fetal Stomach stomach
7 chr5:41801000-41835800 Weak transcription Stomach Smooth Muscle stomach
8 chr5:41801000-41849200 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr5:41801200-41849200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr5:41801200-41849200 Weak transcription Fetal Brain Male brain
11 chr5:41804800-41831400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr5:41807400-41831200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr5:41807400-41831600 Weak transcription Thymus Thymus
14 chr5:41807400-41832000 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr5:41807600-41832000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr5:41808000-41830400 Weak transcription Primary B cells from peripheral blood blood
17 chr5:41808000-41830400 Weak transcription HMEC breast
18 chr5:41808800-41831000 Weak transcription Fetal Thymus thymus
19 chr5:41808800-41831400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr5:41809000-41830600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr5:41809000-41832000 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr5:41809800-41836200 Weak transcription Right Ventricle heart
23 chr5:41810600-41830600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr5:41814000-41842200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr5:41816000-41831200 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr5:41816200-41830400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr5:41816200-41830600 Weak transcription HSMM muscle
28 chr5:41816200-41831800 Weak transcription Ovary ovary
29 chr5:41816200-41838600 Weak transcription NHEK skin
30 chr5:41816400-41831400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr5:41816600-41830400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr5:41816600-41831600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr5:41816800-41831200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr5:41817000-41836000 Weak transcription Aorta Aorta
35 chr5:41818400-41832000 Weak transcription Fetal Intestine Large intestine
36 chr5:41818400-41852000 Weak transcription Small Intestine intestine
37 chr5:41819000-41831400 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr5:41819000-41831800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr5:41819200-41852800 Weak transcription Pancreas Pancrea
40 chr5:41821400-41832000 Weak transcription Esophagus oesophagus
41 chr5:41822000-41831000 Weak transcription HUVEC blood vessel
42 chr5:41822600-41836000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr5:41822600-41836000 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr5:41822600-41849200 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr5:41823400-41831600 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr5:41823600-41832200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr5:41823800-41832000 Weak transcription Left Ventricle heart
48 chr5:41824200-41830600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr5:41824200-41831600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr5:41824200-41831800 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015